In this new paper, I described comprehensively the current features of ComplexHeatmap. Thank the executive editor Yong-Xin Liu from iMeta journal for the paper invitation! doi.org/10.1002/imt2.43

🤗¡Hola de nuevo, querida comunidad bioinformática! 🇦🇷🧬Tenemos el agrado de anunciar el XII Congreso Argentino de Bioinformática y Biología Computacional. 🔜Será presencial, en Corrientes (Argentina), el 24 y 25 de noviembre de 2022. Más información: 2022.a2b2c.org.ar

Happy to share the final version of our SuperCell paper on the use of metacell for single-cell RNA-Seq data analysis rdcu.be/cTFKh.

It is now possible to do single cell RNAseq without killing the cells you’re sampling 🤯 nature.com/articles/s4158…

🔵El Simposio Internacional Inmunoterapia 2022: Nuevos Horizontes se realizará en el Centro Cultural de la Ciencia el próximo viernes. Se entregarán títulos Doctor Honoris Causa a destacados referentes. ➡Más información en: bit.ly/inmunoterapia2…

#inmunoterapia2022 From the lab to the clinic. The story of the immune checkpoint inhibitors and its blockade by @JimAllisonPhD, Nobel prize 2018.Immunotherapy has transformed care for many patients with cancer, resulting in dramatic responses that last for years!! #endcancer

10 courses/books to learn bioinformatics 🧵👇

1/n Single-cell data analysis is complex with many tools to choose from - but which ones work best and should be used when? Led by @lukasheumos and @AnnaCSchaar, we wrote a free online book that aims to guide single-cell data analysts: sc-best-practices.org

The science of #immunotherapy can cure a patient's otherwise incurable cancer. But sometimes immunotherapy fails completely Shockingly, we hardly know why. A meta-analysis of #Genomics & #Transcriptomics in >1,000 immunotherapy-treated patients aims to better understand why🧵

Can we predict the immune state of the tumor microenvironment from the blood? We developed a method to infer the tumor immune state from blood scRNAseq data, leading to improved predictions of immunotherapy response in head & neck cancer patients. 🧵biorxiv.org/content/10.110…

#POSTDOC JOB ALERT #Switzerland #bioinformatics Love coding, #singlecell, statistics, immunology, mountains? Want to work in a motivating, cutting-edge #translational #cancer research environment?

Argentinian mathematician Luis Caffarelli is the first person born in South America to win the Abel Prize go.nature.com/3z7REx8

Fantastico día con mi equipo en ⁦AACR⁩ Annual Meeting of the American Association of Cancer Research. Gracias totales ⁦Mariana Salatino⁩ ⁦Montana Manselle⁩ ⁦Flor Veigas⁩ ⁦Yamil Mahmoud⁩

I am excited that CPA is now featured on the cover of the June issue of Mol Syst Biol, highlighting our work on modeling single-cell perturbations. Read about the work in the following thread and paper:embopress.org/doi/full/10.15…

🔜Próximo curso online co-organizado por sus docentes y la A2B2C : 👉"Tópicos de Bioinformática Estructural" 📌Jue 10, Vie 11, Sab 12, Jue 17, Vie 18 y Sab 19 agosto de 2023. 🕐 Jue y Vie, 18 a 21 h; Sab, de 10 a 14 h (GMT -3) ✅Entrega de certificados

Modeling T cell temporal response to cancer immunotherapy rationalizes development of combinatorial treatment protocols | Nature Cancer nature.com/articles/s4301…

Want to hear about the latest updates/new techniques in single cell and spatial genomics? Check out the full agenda for our Single Cell Genomics Day on Friday, 3/29. All talks will be live-streamed (no registration required) at satijalab.org/scgd

1/ Unpopular opinion in bioinformatics: knowing the tools out there is more crucial than starting from scratch. 🧵

Single Cell Genomics Day starts tomorrow at 10AM ET! Come for the awesome keynotes (Jason Buenrostro , Xiaowei Zhuang, IdoAmitLab) and to learn about our favorite new methods and trends for the field in the last year. All talks streamed on Youtube and satijalab.org/scgd

1/ Thrilled to share our new paper, out today in nature: "Non-invasive profiling of the tumour microenvironment with spatial ecotypes". Paper (open access): nature.com/articles/s4158…