Using #PhyloSuite for molecular #phylogeny and #tree ‐based analyses onlinelibrary.wiley.com/doi/full/10.10…
Available at: github.com/dongzhang0725/…
#iTOL #alignment #phylogenetics
@Wileymicrobio Wiley Ecology & Evolution Wiley Plant Science

iMeta|Complete telomere-to-telomere assemblies of two sorghum genomes to guide biological discovery iMeta Wiley in research youtu.be/4cOyGGhaYhE

We just published a short paper on iMeta to introduce SeqKit's new functionality, performance optimizations, and improved user-friendliness, since the initial publication 7 years ago. onlinelibrary.wiley.com/doi/10.1002/im…

#Clinical features and #molecular landscape of #cuproptosis signature‐related molecular subtype in #gastric #cancer onlinelibrary.wiley.com/doi/full/10.10…
#CancerResearch #Bioinformatics #prognosis #MedTwitter
Wiley Biomedical Science Wiley Clinical Health

iMeta | Arbuscular mycorrhizal fungal interactions bridge the support of root-associated microbiota for slope multifunctionality in an erosion-prone ecosystem iMeta Wiley Microbiology Wiley Ecology & Evolution youtu.be/t8j9k2XKZvQ

iMeta | Bacmethy: A novel and convenient tool for investigating bacterial DNA methylation pattern and their transcriptional regulation effects iMeta Wiley Microbiology youtu.be/BR_eyB-cv1E

#Microbiome ‐mediated alleviation of #tobacco replant problem via #autotoxin degradation after long‐term continuous #cropping onlinelibrary.wiley.com/doi/full/10.10…
#ecology #soil #replant #soil health
Wiley Microbiology Wiley Plant Science Wiley Ecology & Evolution

Black rice diet alleviates colorectal #cancer development through modulating #tryptophan #metabolism and activating #AHR pathway onlinelibrary.wiley.com/doi/10.1002/im…
#guthealth #CRC #CancerResearch #microbiome #Diet
Wiley Microbiology Wiley Biomedical Science Wiley Clinical Health

Deciphering unique and shared interactions between the human gut microbiota and oral antidiabetic drugs
onlinelibrary.wiley.com/doi/full/10.10…
#microbiome #guthealth #drug #T2D #antidiabetic
Wiley Microbiology Wiley Clinical Health Wiley Biomedical Science

The Microbiome Protocols eBook initiative: Building a bridge to microbiome research
#microbiome #protocol #metabolome #eBook onlinelibrary.wiley.com/doi/full/10.10…
Yunyun Gao Yong-Xin Liu Wiley Microbiology Wiley Ecology & Evolution Wiley in research

#Vaginal #microbiota are associated with in vitro fertilization during female #infertility , a moderate abundance of #Lactobacillus  crispatus and Lactobacillus iners is found beneficial for pregnancy onlinelibrary.wiley.com/doi/full/10.10…
#IVF Wiley Microbiology Wiley Biomedical Science Wiley Clinical Health…

From mechanism to application: Decrypting light‐regulated denitrifying microbiome through geometric deep learning onlinelibrary.wiley.com/doi/10.1002/im…
#GNN #deeplearning #microbiome #optogenetics
Wiley Ecology & Evolution Wiley Microbiology

iMeta | The gut microbiota-aromatic hydrocarbon receptor (AhR) axis mediates the anticolitic effect of polyphenol-rich extracts from Sanghuangporus doi.org/10.1002/imt2.1… iMeta Wiley Biomedical Science Wiley Microbiology youtu.be/KKmCEa7fHgw

iMeta | Deciphering unique and shared interactions between the human gut microbiota and oral antidiabetic drugs doi.org/10.1002/imt2.1… iMeta Wiley Microbiology Wiley Biomedical Science youtu.be/cApU-n3la-8

Our collaboration with Prof. Yang-Yu Liu Yang Liu is published in Nature Communications! We proposed a data-driven approach to predict and understand the colonization resistance of microbial communities, and performed validations in the gut microbiome.
doi.org/10.1038/s41467…

PHGD: An integrative and user‐friendly database for plant hormone‐related genes. Available: phgd.bio2db.com
onlinelibrary.wiley.com/doi/10.1002/im…
#database #plants #hormones #websites #bioinformatics
Wiley Plant Science Wiley in research

Infant age inversely correlates with gut carriage of resistance genes, reflecting modifications in microbial carbohydrate metabolism during early life doi.org/10.1002/imt2.1… iMeta Wiley Microbiology Wiley Biomedical Science youtu.be/DsF480RcmKo

The gut microbiota‐aromatic hydrocarbon receptor ( #AhR ) axis mediates the anticolitic effect of polyphenol‐rich extracts from Sanghuangporus onlinelibrary.wiley.com/doi/full/10.10…
#IBD #microbiome #guthealth #MedTwitter
Wiley Microbiology Wiley Biomedical Science Wiley Clinical Health

iMeta | “Nutrient–fungi–host” tripartite interaction in cancer progression doi.org/10.1002/imt2.1… iMeta Wiley Biomedical Science Wiley Microbiology youtu.be/hCSgKxaACcY

A metagenomic catalog of the early-life human gut virome
#microbiome #metagenomics #virome #infant nature.com/articles/s4146…