There is some panic and confusion about whether we will ever get an effective #COVID19 vaccine. Ruslan Medzhitov and I discuss immunity that develops after viral infection vs. vaccines, and our outlook on why vaccines are likely to work. (1/n)

(1/n) Excited to present collaborative work with Prof. Akiko Iwasaki F. Perry Wilson, MD MSCE, Yale Impact, Mila - Institut québécois d'IA, Guy Wolf! We explore 54 million cells, 18 clinical variables from YNHH patients with Multiscale PHATE to find features predictive of outcome. biorxiv.org/content/10.110…

Our lab, along with Yale Department of Genetics @YaleSEAS is excited to bring you the third edition of our Machine Learning for Single Cell Analysis Workshop, totally virtual in January! eventbrite.com/e/machine-lear…

Happy to share our recent work on the role of Tim-3 on Dendritic cells in Cancer! Huge thanks to all involved especially my mentor maximus Vijay Kuchroo Lab. nature.com/articles/s4158… Brigham and Women’s Research Brigham and Women's Neurology Broad Institute nature

New work from our lab and Yosef Lab just out in Cell. A wonderful collaborative effort spearheaded by @DrChaoWang1 and Allon Wagner. We developed and validated a computational algorithm to decipher metabolic networks from transcriptional data! authors.elsevier.com/c/1dL6bL7PXe~oT

Hey everyone! I recently started writing for Medium and just published my first article in their Towards Data Science publication! I write about an innovative data visualization algorithm my lab uses frequently called PHATE from the Krishnaswamy Lab. towardsdatascience.com/why-you-should…

Proud to announce the dissertation defense Manik Kuchroo, who has worked on amazing projects involving coarse graining of data, visualization and multimodal data integration. DM me for zoom link!

1/5 Check out SCAVENGE, led by Fulong Yu in the Sankaran Lab (Vijay Sankaran) - a new method which maps causal variants to their relevant cellular context using single-cell epigenomic data: biorxiv.org/content/10.110…

Excited to have our work on Multiscale PHATE, COVID19 with Prof. Akiko Iwasaki, F. Perry Wilson, MD MSCE, Yale Impact, Mila - Institut québécois d'IA, Guy Wolf out in Nature Biotechnology! Spearheaded by Manik Kuchroo, Jessie Huang and Patrick Wong. We explore 54 million cells to find features predictive of mortality.

NBC news coverage of Prof. Akiko Iwasaki and I speaking about the project nbcconnecticut.com/news/coronavir…

Female scientists at NYU feel utterly betrayed today, myself included. Where does Title IX start and end? If you’re willing to support the women at NYU, we would appreciate if this were spread far and wide. #WomenInScience #WomenInSTEM NIH HHMI #Cancer #Science

I would like everyone in science to read the painful, poignant description of what, exactly, Sabatini did to women under his mentorship. It should make you sick to your stomach. I don't think I could still be in science if I'd faced any of this. docdroid.net/IbuM7VK/search…

We made the cover!! Check out multiscale phate in this issue!!

Incredible week of Harvard commencements for classes of 2020-2022 - officially Juhi R. Kuchroo MD PhD and Karan Ganjawalla MD DMD! Kuchroo Lab Manik Kuchroo The Harvard/MIT MD-PhD Program

Grateful for the privilege to pump/breastfeed but incredibly saddened for other mamas by empty formula shelves in stores SO many months after the #formulashortage began - SCOTUS Updates The White House how about you help us feed our children instead of taking our rights away?

Spotted - Malcolm Gladwell in Miami with Manik Kuchroo . Thought of asking him if 10000 hrs of abuse as a resident would make me a better doctor & human but worried that was too spicy for our 1st meeting so settled for this pic instead #medtwitter #malcolmgladwell #imresidency

(1/n) Today I'm proud to present our work on learning dynamics in cancer using neural ODEs and optimal transport! biorxiv.org/content/10.110…

(1/n) We are excited to present a new multiscale data exploration tool called CATCH to identify signatures of immune activation in the first single cell atlas of human retinas affected by age-related macular degeneration (AMD) nature.com/articles/s4146…

(1/n) Happy to share our work Time-Inhomogeneous Diffusion Geometry and Topology, published in the SIAM journal on the Mathematics of Data Science (SIMODS) ! epubs.siam.org/doi/abs/10.113…

Excited to have our article "Trellis tree-based analysis reveals stromal regulation of patient-derived organoid drug responses," out in Cell today!! Great collaboration with Chris Tape lead by Maria Ramos and Alex Tong! authors.elsevier.com/sd/article/S00…