Our next Center for Integrated Cellular Analysis Virtual Seminar (12PM on 4/16)

Carol Dalgarno & Longda Jiang use Perturb-seq+Parse Biosciences+Ultima Genomics to perturb signaling regulators across cell lines & infer causal regulatory changes from scRNA-seq/spatial data.

Free registration: nygenome.zoom.us/meeting/regist…

Talk by Mysteriously Unnamed on comparisons of multiplexed in situ gene expression profiling technologies #singlecellgenomicsday

Great talk from IdoAmitLab on Zman-seq; tackling time in spatial and single-cell genomics #singlecellgenomicsday

Talk by Yanay Rosen on Universal Cell Embeddings - a foundation model for cell biology #singlecellgenomicsday

Talk by Xiaowei Zhuang from Harvard University on spatially resolved single-cell genomics and making a cell atlas of the human and mouse brain #singlecellgenomicsday

Talk by Longda Jiang and Carol Dalgarno on single cell perturbation dictionaries #singlecellgenomicsday

Marie Schott and Daniel Leon-Perinan on Open-ST: high-resolution spatial transcriptomics in 3D at #singlecellgenomicsday

Talk on new methods in single-cell epigenomics from Jason Buenrostro from Harvard University at #singlecellgenomicsday

Thanks Alex for live-illustrating our #singlecellgenomicsday workshop today! You can access the free Youtube livestream at satijalab.org/scgd/

Single Cell Genomics Day starts tomorrow at 10AM ET!

Come for the awesome keynotes (Jason Buenrostro , Xiaowei Zhuang, IdoAmitLab) and to learn about our favorite new methods and trends for the field in the last year. All talks streamed on Youtube and satijalab.org/scgd

Our Single Cell Genomics Day - highlighting our favorite new sc/spatial methods - starts Friday at 10AM ET!

The most common question we get: is this open to anyone? Yes! Talks are free and live-streamed (no registration required) on Youtube and satijalab.org/scgd

Want to hear about the latest updates/new techniques in single cell and spatial genomics? Check out the full agenda for our Single Cell Genomics Day on Friday, 3/29. All talks will be live-streamed (no registration required) at satijalab.org/scgd

What if 1 million scRNA-seq libraries can be prepared within $1k? Here we go 👉 21 million cells from 623 mouse tissues, spanning 5 life stages & 3 genotypes, all in a SINGLE study by ONE remarkable student Zehao Zehao Zhang from our lab Rockefeller University! shorturl.at/epsz7

Want to infer causal regulatory changes from scRNA-seq/spatial data? We combined Perturb-seq with Parse Biosciences + Ultima Genomics to systematically perturb signaling regulators across six cell lines and learn their downstream targets. Preprint and data at biorxiv.org/cgi/content/sh…

Want to hear about the latest updates/new techniques in single cell and spatial genomics? Check out my lab's eighth annual Single Cell Genomics Day on March 29. Keynotes from IdoAmitLab Jason Buenrostro and Xiaowei Zhuang. Please RT/spread the word! satijalab.org/scgd