
Takafumi Ojima
@takaojima
Research Associate, Dep. Genome Informatics in @UTokyo_News_en, PhD @osaka_univ_e, MD @tohoku_univ_med , Interested in WGS🧬 & PGS🎯
ID: 1706508958461296640
https://orcid.org/0000-0003-1197-0574 26-09-2023 03:20:28
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82 Followers
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Excited to share our latest manuscript on "Dual exposure-by-polygenic score interactions highlight disparities across social groups in the proportion needed to benefit" with Greg Gibson (Greg Gibson), medrxiv.org/content/10.110… [1/9]

Grad to see our Comment about inconsistent embryo selection across PRS methods is out in Nature Human Behaviour! nature.com/articles/s4156… Thanks again to the great collab with specialists for genetics/ELSI Masato Akiyama, Kazuto Kato, Soichi Ogishima, Kyuto Sonehara, Kenichi_Yamamoto_Osk, YukinoriOkada


Please check our platform talk at #ASHG2024🎉 1. Deciphering genetic contribution of ancient hunter-gatherer Jomon in Japanese Populations, Kenichi_Yamamoto_Osk, Session 16. 2. Enhancing regulatory variant prioritization via long-range DNA seq and multi-task learning, Qingbo Seiha Wang, Session 73.



Genetic & phenotypic impact of ancient hunter-gatherer "Jomon" on modern Japanese🧬. Geographical diversity of Jomon genome proportion across Japanese islands🗾🏝️& link with obesity⚖️. Work with Kenichi_Yamamoto_Osk & Shigeki Nakagome using BBJ !! Now Nature Communications ㊗️ nature.com/articles/s4146…

Grad to see our latest work about the impact of ancient hunter-gatherer Jomon in the present-day Japanese populations is out in Nature Communications ! nature.com/articles/s4146… Thanks again for the great collaboration with YukinoriOkada, Shigeki Nakagome, and BBJ.


📢Blood DNA virome🧬🦠 assocites autoimmune diseases🔬. Endogeneous human herpesvirus 6B (eHHV-6B) has systemic lupus erythematosus (SLE) risk. Increased anellovirus in SLE, rheumatoid arthritis (RA), COVID-19 Nature Genetics📰#wgs #lupus #virus #covid #gwas nature.com/articles/s4158…

Human papillomavirus (HPV)🦠integration into human host genome🧬😃drives HPV+ head & neck cancers🦀. Tumor whole-genome seq identified intratumor clonal heterogeneity & genomic instability. Now in Nature Communications🎉 #cancer #genome #virus #HPV #wgs #papilloma nature.com/articles/s4146…




Germline & somatic mutations at MHC & IGH define COVID-19 vaccine immunogenicity. mCA at 6p-MHC, 14q-IGH, mosaic loss of sex chromosome decrease vaccine titer but increase infection, allergy, rheumatic disease risk. Kyuto Sonehara 南宮湖(Ho Namkoong) Cell Genomics cell.com/cell-genomics/…

Our paper on germline/somatic mutations influencing COVID-19 vaccine immunogenicity is out Cell Genomics! cell.com/cell-genomics/…



How might polygenic risk scores enhance the management of type 2 #diabetes #genetics Diabetologia link.springer.com/article/10.100…

Pathway-stratified polygenicity🧬and single cell, metabolome, proteome projection revealed East Asian-specific negative genetic correlation between respiratory🫁& cardiometbolic🫀diseases (e.g. asthma/COPD↔️diabetes). Nature Communications #GWAS #PRS #PGS #proteome nature.com/articles/s4146…

Japan Omics Browser (JOB) japan-omics.jp by Yugo Takahashi & Qingbo Seiha Wang is published #BMCGenomics㊗️. Integrative visualization🎦of Japanese molecular QTL databases🧬💾. bmcgenomics.biomedcentral.com/articles/10.11… #QTL #pQTL #eQTL #GWAS
