😍🧬 #Nanopore #sequencing

Starting soon at 4:00 PM in Hall L - Oxford Nanopore Sundown Symposium! #ESCMID2024

Starts tomorrow - Register here - lnkd.in/d4fD4A-s
Live reviews - lnkd.in/d6a3_Z4H

#BasicsOfNGS #Illumina #IonTorrent #Nanopore  # #DNASeq #PacBio #NGS_data_analysis #Anaconda #Conda #Conda #SamTools #bcftools #fastqc #multiqc #BurrowsWheelerAlignmentAlgorithm

Day 11 of #ADSB2024 , the Tiny Earth inspired short course on Antibiotic discovery Bioscience and Bioengineering IIT Jodhpur with Prof. Animalcules

We got about 200 Mb of data per isolate from our Oxford Nanopore MinION run after 20 hours. We assembled in Indian Institute of Technology Jodhpur computer center for data analysis.

Happy to present banana 🍌 pangenome using Oxford Nanopore duplex data at #nanoporeconf The insights obtained help in breeding new varieties that are resistant to Fusarium Tropical Race 4 (TR4) and Black Sigatoka. Thanks Willem van Rengs for the assemblies and comparisons.

-
a VERY RARE Capture of

The TheLongReadMaster

…. probably riding his horse 🐴

somewhere in West-Brabant …

Thank you Oxford Nanopore !

#Green flashing #Smile
#Nanopore sequencing
#ADSB2024 #IITJ
Shankar Manoharan
Bioscience and Bioengineering IIT Jodhpur
Indian Institute of Technology Jodhpur
Animalcules
Aastha Kapoor
Bani Shree

#SyracuseUniversity patent app, #US20240125728A1 for nanopore sensor with unprecedented specificity and single-molecule precision. This innovative design uses a protein pore and antibody-mimetic binder, capable of detecting diverse proteins by their unique electrical signatures

#LatePost

Day 10 of #ADSB2024 , the Tiny Earth inspired short course on Antibiotic discovery from soil bacteria Bioscience and Bioengineering IIT Jodhpur Indian Institute of Technology Jodhpur with Animalcules

As our Oxford Nanopore MinION was spewing out reads, we prepared for genome analysis with a lecture on microbial genomics.

It begins #ESCMID2024 ! Swing by booth C3 to meet the Oxford Nanopore team & discuss infectious disease applications including:
🧫 Microbial isolate whole genome sequencing
🦠 Full-length 16S microbial identification
🤧 Influenza WGS
🧬 Pathogen-agnostic metagenomics
#ESCMIDGlobal

🍿 Pop corn ✅
🪩 Party ✅ thank you Oxford Nanopore
🥰 Perfect company ✅
🦠 Part 3 of #ESCMIDGlobal2024 here we go!

Just got back after a fantastic 2 days at the #UKDNAWG24 conference where I presented my PhD research - using Oxford Nanopore Flongles for #DNA barcoding and #eDNA #metabarcoding . What a wonderful community, excited for next year already!

#ECCMID24 Judith Breuer: Interesting slide of comparative sensitivity of untargeted nanopore, Illumina and Twist enrichment panel for detection of viral DNA/RNA in spiked samples

T2T uses PacBio HiFi Seq: long reads (up to 20 kb) + high accuracy (<0.5% error), Oxford Nanopore Technologies (ONT): ultra-long reads (>100 kb) + bit lower accuracy

HiFi accuracy + ONT read length => more contiguous assemblies, better resolution: repeats, complex structures

Herro error corrected reads might even be better than @Nanopore duplex reads. by Rita Tam cc Mile Sikic

Discover how multiomic nanopore sequencing on a single platform can be used to maximize the data generated from your valuable research samples in Oxford Nanopore’s latest Brochure.

Download now to learn more >>> hubs.ly/Q02tT-pt0

Register here - lnkd.in/daXyJRvcLive reviews - lnkd.in/d6a3_Z4H #BasicsOfNGS #Illumina #IonTorrent #Nanopore #DNASeq #PacBio #NGS_data_analysis #Anaconda #Conda #Conda #SamTools #bcftools #fastqc #multiqc #BurrowsWheelerAlignmentAlgorithm #Bowtie #DrVipinsWorkshop

Was asked in my bioengineering class to discuss an advantage of oxford nanopore sequencing

'you can stream the response'

$BNGO Bionano Announces Publication Showing OGM's High Resolution Structural Variation Detection In Cancer Validated By Cas9-Directed Nanopore Sequencing