Rahul Satija
@satijalab
Core Member, New York Genome Center; Associate Professor, Biology, NYU
ID:76515242
http://www.satijalab.org 23-09-2009 01:13:40
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Our next Center for Integrated Cellular Analysis Virtual Seminar (12PM on 4/16)
Carol Dalgarno & Longda Jiang use Perturb-seq+Parse Biosciences+Ultima Genomics to perturb signaling regulators across cell lines & infer causal regulatory changes from scRNA-seq/spatial data.
Free registration: nygenome.zoom.us/meeting/regist…
Talk by Mysteriously Unnamed on comparisons of multiplexed in situ gene expression profiling technologies #singlecellgenomicsday
Great talk by Sandra Nakandakari on LIPSTICK- a universally applicable method to record cellular interactions via spatial proximity #singlecellgenomicsday
Thanks to our wonderful speakers, audience members, Alex Cagan, and National Human Genome Research Institute (via Center for Integrated Cellular Analysis) for such an enjoyable #singlecellgenomicsday 2024! After 8 years of SCGD its incredible to see innovation in the field accelerating- see you next year!
As IdoAmitLab likes to quote : '‘Wherever anything lives, there is, open somewhere, a register in
which time is being inscribed.' With Zman-seq, that now includes single cell genomics! Thanks for a wonderful talk!
From Yanay Rosen and Jure Leskovec : A foundation model that universally maps cells across tissues and species! Learn more at : github.com/snap-stanford/…
Lovely talk from Longda Jiang and Carol Dalgarno on how to build dictionaries perturbations. Highlights work from Nir Hacohen’s immune dictionary (nature.com/articles/s4158…), and our systematic Perturb-seq analysis of signaling regulators (biorxiv.org/content/10.110…)
Really exciting new technology from Caleb Lareau for RNA-based enrichment of rare cell types followed by scRNA-seq. Learn more at: clareaulab.com/perffseq/
Beautiful new work from Nikolaus Rajewsky lab on DIY high-resolution and 3D spatial transcriptomics. Learn more at rajewsky-lab.github.io/openst/latest/
Stunning talk from Jason Buenrostro at #singlecellgenomicsday , highlighting how to squeeze TF footprinting insights out of scATAC-seq data, and identifying transcription factors that drive HSC aging.
Thanks Alex for live-illustrating our #singlecellgenomicsday workshop today! You can access the free Youtube livestream at satijalab.org/scgd/
Single Cell Genomics Day starts tomorrow at 10AM ET!
Come for the awesome keynotes (Jason Buenrostro , Xiaowei Zhuang, IdoAmitLab) and to learn about our favorite new methods and trends for the field in the last year. All talks streamed on Youtube and satijalab.org/scgd
What a PERFFect day to share our new preprint!
With Tsion Abay #BobStickels Meril Takizawa Ronan Chaligne (He/Him) and Ansu Satpathy, we introduce PERFF-seq, a new experimental approach to studying rare cells with scRNA-seq via transcript-specific enrichment. biorxiv.org/content/10.110… 1/n