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A review on the concept of a core microbiome -- does a set of functions or taxa exist that distinguish our microbiomes as "human"? Complications: - Core required functions might depend on diet - Individuals' immune systems might shape the core microbiome mdpi.com/2072-6643/14/1…

MetaPhlAn version 4 is out! Big improvements with the possibility to profile uSGBs (i.e. MAG-defined species), better markers, ~27k tot SGBs (species), estimation of the unknowns, and more. DB based on >1M genomes+MAGs! Preprint, code, tutorials available! biorxiv.org/content/10.110…

📰 Stool microRNA profiles reflect different dietary and gut microbiome patterns in healthy individuals #miRNA #biospecimens ➡️ Read more: bit.ly/3Czyfqc #WoM2022 #sibo #healyourgut #constipation #goodbacteria #HealthyEating

Proud to be named a Highly Cited Researcher 2022 by Clarivate for Academia & Government. See the full list bit.ly/3fPhNLo #HighlyCited2022 Time to thank all collaborators who contributed to this achievement!!!

Thrilled to share the latest work from MASTER IA H2020 at Nature Protocols! We developed an improved protocol for the characterization of microbiomes in food processing environments. It covers both sampling and DNA extraction procedures nature.com/articles/s4159…

All this was possible due to the fantastic work done by all MASTER IA H2020 team members, including Paul Cotter Danilo Ercolini Nicola Segata teams, among others. And especially by Coral23B and José F. Cobo-Díaz

John F. Cryan claudio d'addario Danilo Ercolini can you please share these opportunities?🤓

"Microbiome mapping in the food industry is fundamental to identify the microbes involved in the food chain, they can contaminate our food and have beneficial effect on our health or occasionally determine spoilage of our food products" Danilo Ercolini will give a talk at #FSM24

Well done to Vincenzo Valentino, Raffaele Magliulo, @DominicFarsi, Prof. Orla O’Sullivan, Danilo Ercolini, Francesca De Filippis on this new output from the DOMINO EU project

So when we are exposed to environmental pollutants, our gut microbiome changes towards an adaptation to the contaminants, which is a further indication that we co-evolve with our microbes! search.app/zChTusrtiz7W4z…

So happy 😃 - Intestinal parasite Blastocystis is linked to healthier diets and favorable cardio metabolic outcomes. Huge step forward!⁦Nicola Segata⁩ ⁦Segata Lab⁩ ⁦Edoardo Pasolli⁩ ⁦Francesco Asnicar⁩ ⁦Tim Spector MD (Prof)⁩ sciencedirect.com/science/articl…

Results of the largest Microbiome mapping campaign in the food industry out today in #npjbiofilmsandmicrobiome a further result of the great MASTER IA H2020 project! Francesca De Filippis Paul Cotter Segata Lab Edoardo Pasolli Avelino Alvarez Narciso Martín Quijada rdcu.be/dPMIW

Microbiome mapping in dairy industries shows substantially different microbiome compositions from surfaces through raw materials and end products. New findings from Danilo Ercolini, Paul Cotter, et al.: nature.com/articles/s4152…

We're getting closer to understanding why fermented foods are beneficial for health. .Danilo Ercolini, Prof. Orla O’Sullivan, Paul Cotter, et al. update what is new in the field: …icro-journals.onlinelibrary.wiley.com/doi/full/10.11…

Gaba-producing lactobacilli boosting cognitive reactivity to negative mood…sciencedirect.com/science/articl…

Feeding Gut Microbes to Nourish theBrain: Unravelling the Diet–Microbiota–Gut–Brain Axis Our new review just out in Nature Metabolism - Led by fantastic postdoc Elizabeth Schneider with Kenneth J.O'Riordan & UCCpsychiatry APC Microbiome Ireland UCC Research UCC Anat. & Neurosci trebuchet.public.springernature.app/get_content/fc…?

A milestone in Food Science - Unprecedented food microbial diversity of 2,500 metagenomes published in Cell. Huge accessible database of genomes to study food microbes! Hard work with Nicola Segata Edoardo Pasolli Paul Cotter and many MASTER IA H2020 partners! rb.gy/yvi7j1

Diversity and functions of the Bifidobacteriaceae in the human gut and their possible link with probiotic preparations. Published today in Cell Reports great job Edoardo Pasolli

Exploring the diversity of Ruminococcus - important gut microbe and finding those from Lachno and those from Oscillospiraceae having different complex carb degradation potential. New in Cell Reports by our team Vincenzo Valentino Francesca De Filippis Edoardo Pasolli

Excited to share our new nature article on gut microbiome research! Our consensus statement sets robust guidelines for determining causality within gut microbiome studies and explores novel therapeutic opportunities. nature.com/articles/s4157…