Solidification of protein aggregates deepens bacterial dormancy: Trends in Microbiology cell.com/trends/microbi…

remember that classic proof that √2 is irrational? here is a great way to test a student's (and your own) understanding 1. modify it to argue that √n is irrational whenever n is not a perfect square 2. show where the proof breaks down when you try to apply it to a perfect

Happy to share our new paper on machine learning and #AI in gut #microbiome. Many thanks Tommaso Rozera Edoardo Pasolli Nicola Segata Segata Lab for the nice writing experience & Gastroenterology Marietta Iacucci for your incredible editorial work #microbiomeclinicians gastrojournal.org/article/S0016-…

RIP prompt engineers. I found an AI Chrome extension that instantly writes better prompts than you. Here’s how it works (free to try):

ChatGPT's new Image Generation dropped less than 24 hours ago Here are 15 great examples of what you can do now, some limitations—and a hidden trick to get instant access if you're still waiting! 1. Life-like photos:

Excited about microbiomes and want to study them at the single-cell level? Join our team to pioneer research using microfluidics paired with automated timelapse microscopy. We're hiring postdocs to push the boundaries of microbial ecology! Apply now: apply.interfolio.com/165601

In #Microbiome 🚨Introducing MIOSTONE: an accurate and interpretable neutral network model for microbiome-disease association that simulates a real taxonomy by encoding the relationships among microbial features 🦠 👉doi.org/pf28

CoverM is published! CoverM: Read alignment statistics for metagenomics academic.oup.com/bioinformatics…

Thrilled that our work on this problem with Karel Břinda, Zamin Iqbal, and others is out in Nature Methods today! We used phylogenetic compression (described in the thread) to compress every microbe ever sequenced onto a flash drive so that it can be searched with a laptop!

Featured Article: Microbiota changes with CRC tumor location Fecal microbial changes in proximal vs distal CRC w/specific microbes linked to tumor location. Multi-cohort analysis demonstrates diagnostic potential of location-specific fecal bacteria in CRC cell.com/cell-host-micr…

Just do it

Ukiyo-e Cuphead Vintage Cartoons Can't get enough of these vintage cartoon posters. You may sometimes get policy restrictions. My prompt below works most of the time. ChatGPT-4o Prompt Alien movie poster in ukiyo-e cuphead 1920s vintage cartoon style Show me your cartoons 😀

墨絵龍との戦い 弍

Terminal Genome Viewer (tgv), written in Rust github.com/zeqianli/tgv

scikit-bio now has a pairwise sequence alignment engine that is versatile, efficient and Pythonic! Highly customizable to many tasks. Independent from hardware architecture. Rigorously tested and just works! Will be maintained as long as scikit-bio lives. scikit.bio/docs/dev/gener…

Happy to share that our study on gut microbiome associations with colorectal cancer (CRC) is out in Nature Medicine! (doi.org/10.1038/s41591…).

OrthoFinder: scalable phylogenetic orthology inference for comparative genomics biorxiv.org/content/10.110… #biorxiv_bioinfo

SEO is dead. a16z just called it: traditional search is dead. Welcome to Generative Engine Optimization (GEO). Now people ask AI, not Google and if you’re not in the answer, you don’t exist. Here’s the mega prompt I use to get my brand recommended by ChatGPT, Claude, and