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Traces of Late Bronze and Early Iron Age Mongolian Horse Mitochondrial Lineages in Modern Populations mdpi.com/1032008 #mdpigenes via Genes MDPI

Evolution of B Chromosomes: From Dispensable Parasitic Chromosomes to Essential Genomic Players | Martina Johnson Pokorná | pubmed.gov/34956308

LotuS2: An ultrafast and highly accurate tool for amplicon sequencing analysis biorxiv.org/content/10.110… github.com/hildebra/lotus2

Sparse: Rapid, Reference-Free Human Genotype Imputation with Denoising Autoencoders biorxiv.org/content/10.110…

Evolution: The oldest sex chromosomes sciencedirect.com/science/articl…

Trees along chromosomes: production pipeline + genome browser. From cat genomics community, yay! github.com/harris-2374/TH…

{MetBrewer} 📦 is officially on Cran 🥳🥳. Contains 50 palettes (including 18 colorblind-friendly) inspired by works at the The Metropolitan Museum of Art. Bring some art to your #dataviz with palettes for every purpose! Ready to use with: install.packages("MetBrewer") #MetBrewer #rstats #r4ds

I am a postdoc in Alexander Suh 서상재’s lab and today will present my and Simone Fouché’s efforts towards a zebra finch pangenome. The most recent genome assembly of this songbird by Vertebrate Genomes Project (VGP) has a high-quality sequence of all autosomes and the Z and W sex chr. #pgg55 #pggflash

A short thread on disentangling cobionts and contamination in Darwin Tree of Life samples for #pgg55 #pggflash. This work is part of the @SangerToL Darwin Tree of Life projects (I usually work on molecular evolution 🦋, but this project was a great excuse to play with other models)

A NEW #anopheles open access data resource. First Southeast Asian #genomic data on An. minimus. A new opportunity for bioinformaticians, analysts or mathematicians interested in #malaria . 📣 bit.ly/3rg7GT1

Omg so close! Only one final chapter layout to check! Really excited about the release of "Machine Learning with PyTorch and Scikit-Learn" (sometime) this month. In the mean time, all the accompanying code materials are already up on GitHub: github.com/rasbt/machine-…

Happy to share that StainedGlass, our tool for visualization of massive tandem repeats, is now published in bioinformatics as an application note! Thanks to Peter Kerpedjiev, Adam Phillippy, EEE, and the T2T consortium! paper: doi.org/10.1093/bioinf… website: mrvollger.github.io/StainedGlass/

Akin mutation signatures

Hi all, excited to share this preprint, which builds upon Santiago Marco-Sola's excellent recent work on the WFA algorithm, which can optimally align long, similar sequences very quickly. biorxiv.org/content/10.110… 1/4

The minimizer Jaccard estimator is biased and inconsistent biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Cool cross contamination visual