
Sam Nicholls @samstudio8.bsky.social
@samstudio8
Prima donna programmer @nanopore. Previously behind the curtain @CovidGenomicsUK. Made @MonsterDNALab @samtomindustrys. Tat tinkerer, bug hunter, burger flipper
ID: 40444555
https://www.samnicholls.net 16-05-2009 10:43:26
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due to circumstances beyond my control, i am attending AWS re:Invent in las vegas, come and find me to talk about Oxford Nanopore bioinformatics workflows


The #EPI2ME team are in ๐บ๐ธ over the next few weeks! Go๐ to Rachel Rubinstein Stephen Rudd & Chris Wright at the Nextflow event in Boston, Sam Nicholls @samstudio8.bsky.social (and Jessica) at Amazon Web Services re:invent in Vegas & I'll be in Houston for NCM with more of the Oxford Nanopore team๐ #wymm #anythinganyoneanywhere



Nice thread summarising Matthew Parker's tour of where Team #EPI2ME is at and what you can expect from us over the coming weeks!




We are hiring at our Oxford Nanopore NYC office! Seeking people with a background in C++ || Machine Learning || Algorithms. Early career applicants very welcome. #TechJobs ejnh.fa.em2.oraclecloud.com/hcmUI/Candidatโฆ

This week's "how to guide" from the Oxford Nanopore bioinformatics workflows group is a very nice primer on a very annoying file format labs.epi2me.io/querying-vcf-fโฆ

This month we have a sizeable hoard of updates including some enhancements to wf-human-variation which should noticeably reduce runtime. Take a look at all the goodies from the Oxford Nanopore bioinformatics workflows February release in our CHANGELOG labs.epi2me.io/epi2me-24.02-0โฆ

Happy release day from the Oxford Nanopore EPI2ME team! Humvar has reached the lofty heights of version 2.0.0 with a new CNV caller. We've also got Salmonella serotyping in bacgen, Canu for cloneval and a new data set to boot! More in our release note: labs.epi2me.io/epi2me-24.03-0โฆ



Looking to the future of Oxford Nanopore with Clive G. Brown at #nanoporeconf: "There's room for terabases on a chip". We're gonna need a bigger wf-human-variation!


EPI2ME CLOUD IS LIVE our overhauled Oxford Nanopore EPI2ME Desktop crams in delightful UX which seamlessly supports our entire suite of bioinformatics workflows on your computer, or in a private stack on our new cloud infrastructure GIVE IT A SPIN labs.epi2me.io/downloads/