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Fresh look at the optimality of the thermodynamic flux-force relationship with stoichiometry in metabolism arxiv.org/abs/2306.02366

On tomorrow's webinar (11:00 UTC), Dr Gael Forget (@GaelForget, Massachusetts Institute of Technology (MIT)), will deliver a lecture on “Data processing and analysis tools: Ocean Colour and Earth Observation with Julia”. You don't want to miss it! Register at - shorturl.at/GHNW5

Great article by David Talmy David Talmy and others making the argument for a quadratic mortality closure on top predators. bg.copernicus.org/preprints/bg-2…

A satisfying resolution to a longstanding conflict between FBA and MCA by Hans Westerhoff sciencedirect.com/science/articl…

The ocean is changing color.  New research by B. B. Cael & @StephAHenson National Oceanography Centre, Kelsey Bisson Oregon State University, Emmanuel Boss University of Maine, & Stephanie Dutkiewicz MIT EAPS. Comments from Luciana Prado @UERJ_oficial & Aurea Ciotti USP - Universidade de São Paulo. Story by Meghie Rodrigues eos.org/articles/more-…

A study of a bioluminescent algal bloom off California confirms a classic hypothesis: Dinoflagellates can form massive blooms in part because they are able to access a large nutrient pool in the deep sea during nightly vertical migrations. In PNAS: ow.ly/aBCt50PG6X6

How does optimal transport allow us to study dynamical systems? How does it connect to control theory, flow matching, & diffusion models? How is it advancing molecular biology research? Find the answers in our tutorial! Recording, slides, & script under bunne.ch/ot_tutorial/.

Marine microorganisms are crucial for ocean health, but the climate crisis is putting stress on oceans. Understanding how marine microbes are affected is key to forecasting the future state of the oceans go.nature.com/3u3Uww5

I miss the days when twitter was considered a natural extension of science communication. In grad school I did an NSF funded science communication fellowship and ‘how to tweet science’ was a full workshop with strategies and writing skills.

Delighted to announce our new paper in Science Magazine. @ChrisKlausmeier, Elena Litchman, and I show how power-law scaling at the micro (individual) level is translated by eco-evolutionary dynamics into power-law scaling at the macro (food-web) level 1/5 science.org/doi/10.1126/sc…

My new book, "Microbes: The Unseen Agents of Climate Change" is now out. global.oup.com/academic/produ…

Did you know that 28 out of 34 signalling pathways, and ~60% of the proteome, respond differently depending on the metal ion environment? Neither did we, but now believe that the metal ion levels are one of the big "known unknowns" in cellular networks biorxiv.org/content/10.110…

Our paper on microbial mortality (or not) by filter feeders is out! @SutherlandLab Portland State Research PSU Biology eurekalert.org/news-releases/…

So nitrogen fixation is an exclusively prokaryotic process, right? Turns out diazotrophs have evolved to become organelles. Incredibly cool work! science.org/doi/10.1126/sc…

A new preprint is out with Ashley Bulseco, Ph.D., Julie Huber, PhD, and undergrad Wenzhou (Meg) Yang, where we look at how specific growth rate is distributed in natural microbial communities. Chemostats and models! doi.org/10.1101/2024.0…

Support for a quadratic mortality closure in marine food web models, and a great read. David Talmy, AW and colleagues 👍 bg.copernicus.org/articles/21/24…

Transporter annotations remain a stubborn blemish for ecologists and systems biologists. I’m hoping this perspective article finds its way to sponsors that can change that. frontiersin.org/journals/syste…

Trevor Platt Science Foundation and Plymouth Marine Lab announce joint sponsorship for one trainee from a developing country to attend the #OTC25. The selected fellow will receive support through the Trevor Platt Science Fund. Apply via OTC25 at oceantrainingcourse2025.esa.int

Genome-scale models in human metabologenomics go.nature.com/3XzLZf8 #Review by Adil Adil Mardinoglu King's College London @KTH & Bernhard Ø. Palsson UC San Diego Systems Biology UC San Diego

Preprint of my first first-author modeling paper (call me a modeler)! A novel framework explains microbial coexistence and their nitrogen dynamics in the ocean!🦠🌊Amazing coauthors Dr. Pearse J Buchanan Irene Zhang 🏳️‍🌈 magdalena san roman Andrew R. Babbin Emily Zakem biorxiv.org/cgi/content/sh…