We created a simple tool that uses Google text-to-speech to create an audio narration for a video file (such as for a tutorial video): github.com/MD-Anderson-Bi… #NCIITCR

.Ethan Cerami and Niki Schultz describe the growing "ecosystem" in cBioPortal including collaborations with IGV Team CIViCdb NGCHM Bioconductor and Cancer Digital Slide Archive #nciitcr19 @NCIDataSci

First tweet I see after responding to a user's email 🙂.

Stop by the #NCIITCR booth at #ISMB19 next week to learn about the open source cancer informatics tools supported by the program and the funding opportunities for supporting your own @NCIDataSci itcr.cancer.gov/about-itcr/new…

Interested in Globus for Box? Contact us! globus.org/connectors/req…

Please don't: 1. Refuse to expose any API and instead require all users to use your platform. 2. Bring data from other resources and platforms into your system, but don’t let your data out. 3. Refuse to interoperate with other systems w/ the same security and compliance

The Next-Generation Clustered Heat Map tool for #galaxy was upgraded recently. Details at bit.ly/2MDEfpx #nciitcr #ngchm

The latest release of the Next-Generation Clustered Heat Map viewer includes many improvements. Read more at bit.ly/2zvEaww #NGCHM #NCIITCR

John Weinstein opening our hands-on workshop on Next-Generation Clustered Heat Maps at the NIH. #NGCHM #NCIITCR bit.ly/2nIa2vM

Attending iBright2019 bit.ly/2MJQLUo? Please visit our poster showing the “Bioinformatics TurDuckEn”, a Next-Generation Clustered Heat Map (NGCHM) containing an RStudio instance containing an #RSHINY app. The app can access the #NGCHM data as a virtual input. #NCIITCR

Our paper describing the interactive Next-Generation Clustered Heat Map (#NGCHM) web builder has been published: bit.ly/2xYir2U Notably, there is an interactive NG-CHM within the paper itself. #NCIITCR

NG-CHMs now have a more flexible panel interface that enables tighter integration with link outs and computational tools. See bit.ly/2zvEaww for details. #NCIITCR #HEATMAP

The NG-CHM @RStudio containers have been updated to the latest NG-CHM viewer release. We've also created variants with preinstalled Bioconductor and #SingleCell R packages Seurat and singleCellTK. For details see bit.ly/2AGSN4o #NCIITCR.

James Taylor memorial fund (JTech) and CSHL announce 2020 Biological Data Science Scholarship. 10 outstanding graduate students will be selected to attend the 2020 Biological Data Science Conference #biodata20 #usegalaxy: forms.gle/PAVeZCqhVJCidq…

Use R/RStudio to combine interactive #DimensionalityReduction plots and Next-Generation Clustered Heat Maps (NG-CHM) for #singlecell (and other) data using #SingleCellExperiment (also works with #Seurat). youtu.be/K8PuHDQYk-g #NCIITCR #RStats #Bioinformatics

Interesting, really. A clustering-independent method for finding differentially expressed genes in single-cell transcriptome data disq.us/t/3rb192w

#MSigDB 7.3 out now! A new sub-collection of vaccine response gene sets courtesy of HIPC, many new cell type signatures, updates for WikiPathways, HPO, Gene Ontology @[email protected], and reactome. Gene annotations from Ensembl 103. See gsea-msigdb.org for details #Bioinformatics

We have updated the Next-Generation Clustered Heat Maps viewer. Adds multiple detail (zoomed) views, a better way to embed NG-CHMs in web pages, and more. For more details: link.ngchm.net/I6sK5W8dk #NCIITCR #heatmap