The Hostile paper was accepted in Oxford Bioinformatics. Thank you reviewers! doi.org/10.1093/bioinf…

Fully funded 3-yr PhD position University of Glasgow Glasgow Microbiology (UK students)- Friend to Foe: Colonisation as an Entry Point for S. aureus Infection findaphd.com/phds/project/f…

Our new review in Nature Reviews Gastroenterology & Hepatology entitled “Fermented foods and gastrointestinal health: underlying mechanisms” is now published. Well done to Arghya Mukherjee 🇮🇳🇮🇪 Samuel Eirini Dimidi PhD RD & MarcoLab rdcu.be/dtjKz

Very happy to see our genome skimming tool Patchwork finally published with GBE (Genome Biology and Evolution)! The software has been developed by Felix Thalén and Clara Koehne performed the benchmarking 1/2 academic.oup.com/gbe/advance-ar…

Great PhD opportunity and an excellent PI to work with.

New publication from our group, led by Ajay Iyer (@[email protected]) & Arghya Mukherjee 🇮🇳🇮🇪, with Beatriz Gómez Eibhlis O’Connor & John Kenny, funded by IAFNS “The impact of live dietary microbes on health: A scoping review” ift.onlinelibrary.wiley.com/doi/10.1111/17… Teagasc APC Microbiome Ireland VistaMilk SFI Research Centre Food for Health Ireland

A recent chat with BBC’s Inside Health re fermented foods can be heard as part of tonight’s programme bbc.co.uk/programmes/m00… Teagasc Teagasc Food Research Programme APC Microbiome Ireland VistaMilk SFI Research Centre Food for Health Ireland SeqBiome

Metagenomic estimation of dietary intake from human stool biorxiv.org/content/10.110… 🧬🖥️💩 Nextflow pipelines github.com/Gibbons-Lab/me…

Happy to announce that my last preprint from the Gibbons Lab at ISB is now out at biorxiv.org/content/10.110… . In the end it took us almost 5 years to make this work well.

Thrilled to have presented at 'Microbiome Interactions in Health and Disease' at the stunning Wellcome Genome Campus. A truly enriching experience exchanging ideas with fellow researchers in such a beautiful setting. Wellcome Connecting Science Wellcome Genome Campus 📷taken by Ramya Balasubramanian

Sai Ravi Chandra Nori doing a great job representing the team at the Microbiome Interactions in Health & Disease meeting today

Exciting 4 year position to work on fitness and the microbiome; closing date March 12th. Susan Joyce VistaMilk SFI Research Centre APC Microbiome Ireland Paul Cotter Science Foundation Ireland Teagasc Food Research Programme topjobs-teagasc.thehirelab.com/LiveJobs/JobAp…

New post-doc opportunity in our laboratory to study the #lung #microbiome as it relates to #cysticfibrosis (combined wet lab and bioinformatics skills required). Apply by midday Irish time April 11th APC Microbiome Ireland topjobs-teagasc.thehirelab.com/LiveJobs/JobAp…

huge congratulations N. Rose Edwin on a fantastic first publication from her PhD thesis VistaMilk SFI Research Centre SoilEnvMicro Florence Abram Amy Fitzpatrick link.springer.com/10.1186/s40793…

Check out the poster from Sai Ravi Chandra Nori at #MicroBio24 today, presenting his work on Lactobacillus jensenii metagenomics Teagasc APC Microbiome Ireland #vaginalmicrobiome

Foldseek-Multimer is a protein complex aligner that is up to 10,000x times faster than SOTA methods without sacrificing quality, enabling the comparison of billions of complex pairs per day. 1/5 📄 biorxiv.org/content/10.110… 💾 github.com/steineggerlab/… 🌐 search.foldseek.com

We’ve got a fantastic PhD opportunity UCD Perinatal Research Centre on Microbiome in Pregnancy ⭐ Full details for this exciting PhD opportunity are below. #jobfairy #pregnancy #microbiome #irishresearch #phdlife Fionnuala McAuliffe NMH & UCD ⁦⁦University College Dublin⁩ ⁦UCD Medicine⁩

We are excited to announce our new study in Nature Medicine on microbial composition in colorectal cancer (CRC) patients in Flanders, Belgium🇧🇪, integrating data from fifteen other studies. Raul Tito-Tadeo nature.com/articles/s4159… Here are the key findings: 🧵👇

Excited to start work on our new Science Foundation Ireland Frontiers for the Future award focusing on the gut microbiome of adolescent athletes APC Microbiome Ireland VistaMilk SFI Research Centre Teagasc Food Research Programme Biochemistry UCC in partnership with Paul Cotter Susan Joyce Sharon Madigan

Latest research from our group on the athlete gut microbiome in @ZoeZhan14710001 ; Cataloging MAGs in elite athlete cohorts. oaepublish.com/articles/mrr.2…… LauraW Liam Walsh Paul Cotter Calum Walsh 🇮🇪🇦🇺 APC Microbiome Ireland Teagasc Food Research Programme VistaMilk SFI Research Centre Science Foundation Ireland Biochemistry UCC