Laurent Gil (@laurentgil33) 's Twitter Profile
Laurent Gil

@laurentgil33

Software developer at Wellcome Sanger Institute

Current projects: @PGSCatalog & OmicsPred

ID: 1238500163108421634

calendar_today13-03-2020 16:21:09

64 Tweet

19 Takipçi

17 Takip Edilen

PGS Catalog (@pgscatalog) 's Twitter Profile Photo

New year, newly released data! This release includes our first PGS for prurigo nodularis (from Chirag Vasavda Dr. Shawn Kwatra Eugene Semenov, MD Sasha Gusev) 👉pgscatalog.org/score/PGS00432…. See pgscatalog.org for all the data, and pgscatalog.org/submit to submit your PGS!

PGS Catalog (@pgscatalog) 's Twitter Profile Photo

The theme of this week's release is pregnancy, with new PGS for preeclampsia (pgscatalog.org/publication/PG…) and gestational thrombocytopenia (pgscatalog.org/publication/PG…). Thanks to the authors from both papers for sharing the scores!

Sam Lambert (@iamslambert) 's Twitter Profile Photo

Excited to share our new preprint describing updates to the PGS Catalog (PGSCatalog.org ) and the PGS Catalog Calulator (pgsc_calc), a new tool for reproducible PGS calculation in the context of genetic ancestry (github.com/PGScatalog/pgs…). Just in time for #ESHG24! /🧵

PGS Catalog (@pgscatalog) 's Twitter Profile Photo

Some 🌞Summer PGS🌞 data for you in our latest release: - BMI-stratified T2D PGS Takafumi Ojima YukinoriOkada pgscatalog.org/publication/PG… - Multi-ancestry BMI PGS Tinashe Chikowore pgscatalog.org/publication/PG… - Liver cirrhosis pgscatalog.org/publication/PG… ... & more @ pgscatalog.org!

PGS Catalog (@pgscatalog) 's Twitter Profile Photo

Takafumi Ojima YukinoriOkada Tinashe Chikowore We've also been hard at work on performance improvements to our PGS Catalog calculator software, check out the latest release on our GitHub (github.com/PGScatalog/pgs…) and see our detailed documentation (pgsc-calc.readthedocs.io/en/latest/).

PGS Catalog (@pgscatalog) 's Twitter Profile Photo

Now available in the PGS Catalog: pgscatalog.org/score/PGS00492… thanks to James Pirruccello et al for submitting! Submit your score pre or post-publication/preprinting, more info at pgscatalog.org/submit.

PGS Catalog (@pgscatalog) 's Twitter Profile Photo

Last of the summer PGS, new metaPRS in our latest release: - For T2D, including many evaluations from Dr. Scott C. Ritchie @minouye271 et al pgscatalog.org/score/PGS00492… - New PGS for CAD, IS, ICH from China Kadoorie Biobank in Nature Human Behaviour pgscatalog.org/publication/PG… Stay tuned for fall 🍂!

BHF Cardiovascular Epidemiology Unit at Cambridge (@cambridge_ceu) 's Twitter Profile Photo

Out today in Nature Genetics! Important new updates to the Polygenic Score (PGS) Catalog, & a new software tool that simplifies the calculation of polygenic scores in the context of genetic ancestry 👉 tinyurl.com/fa5ts5a3 Sam Lambert @minouye271 Dr. Scott C. Ritchie Florent Yvon

Out today in <a href="/NatureGenet/">Nature Genetics</a>!

Important new updates to the Polygenic Score (PGS) Catalog, &amp; a new software tool that simplifies the calculation of polygenic scores in the context of genetic ancestry

👉 tinyurl.com/fa5ts5a3

<a href="/iamslambert/">Sam Lambert</a> @minouye271  <a href="/sritchie73/">Dr. Scott C. Ritchie</a> <a href="/Florent_Yvon/">Florent Yvon</a>
EMBL-EBI (@emblebi) 's Twitter Profile Photo

📣 New updates to the PGS Catalog. These include multi-ancestry data and a new Calculator to simplify PGS calculations across different ancestries. Learn more about how these updates could enable more equitable disease risk predictions. ebi.ac.uk/about/news/tec…

📣 New updates to the <a href="/PGSCatalog/">PGS Catalog</a>.

These include multi-ancestry data and a new Calculator to simplify PGS calculations across different ancestries. Learn more about how these updates could enable more equitable disease risk predictions.

ebi.ac.uk/about/news/tec…
Health Data Research UK (HDR UK) (@hdr_uk) 's Twitter Profile Photo

📢 The Polygenic Score (PGS) Catalog has been updated, including data added from multi-ancestry or non-European populations and a PGS Catalog calculator. The project is a collaborative effort between Cambridge University, EMBL-EBI and NHGRI-EBI GWAS Catalog. Learn more: hubs.li/Q02Rdfc60

Sam Lambert (@iamslambert) 's Twitter Profile Photo

Check out the latest developments of all things PGS Catalog, out now in Nature Genetics (🔗: rdcu.be/dVakA )! In this paper we describe big increases in the data content (and diversity) and our tool for PGS calculation (github.com/PGScatalog/pgs…).

Check out the latest developments of all things <a href="/PGSCatalog/">PGS Catalog</a>, out now in <a href="/NatureGenet/">Nature Genetics</a> (🔗: rdcu.be/dVakA )!

In this paper we describe big increases in the data content (and diversity) and our tool for PGS calculation (github.com/PGScatalog/pgs…).
PGS Catalog (@pgscatalog) 's Twitter Profile Photo

>5000 Polygenic scores now available at PGSCatalog.org! As of today's release we've broken 5k PGS, indexing data from 673 unique publications. A big thank you to the authors submitting their data and our team in pursuit of #openscience, #FAIRdata, and reproducibility!

&gt;5000 Polygenic scores now available at PGSCatalog.org! As of today's release we've broken 5k PGS, indexing data from 673 unique publications. A big thank you to  the authors submitting their data and our team in pursuit of #openscience, #FAIRdata, and reproducibility!
Sam Lambert (@iamslambert) 's Twitter Profile Photo

A great day for #FAIRdata and polygenic score research - the PGS Catalog continues to grow past 5000 scores! In honour of the occasion Florent Yvon & I commissioned some AI art (you should see the ones we scrapped). A massive congrats to the whole PGSCatalog.org team!

A great day for #FAIRdata and polygenic score research - the <a href="/PGSCatalog/">PGS Catalog</a> continues to grow past 5000 scores! 

In honour of the occasion <a href="/Florent_Yvon/">Florent Yvon</a> &amp; I commissioned some AI art (you should see the ones we scrapped). A massive congrats to the whole PGSCatalog.org team!
PGS Catalog (@pgscatalog) 's Twitter Profile Photo

Interested in software tools for calculating polygenic scores? Sam Lambert & @nebfield are giving an EMBL-EBI Training webinar December 4th about our pgsc_calc tool and it's capabilities for reproducible PGS calculation: ebi.ac.uk/training/event…! Join in or catch the recording after.

Interested in software tools for calculating polygenic scores? <a href="/iamslambert/">Sam Lambert</a> &amp; @nebfield are giving an <a href="/EBItraining/">EMBL-EBI Training</a> webinar December 4th about our pgsc_calc tool and it's capabilities for reproducible PGS calculation: ebi.ac.uk/training/event…! Join in or catch the recording after.
Loïc Lannelongue (@loic_lnlg) 's Twitter Profile Photo

🚨We're recruiting! Interested in making science and computing more environmentally friendly? Now is the time! Very excited to build a research group at Cambridge University to expand our Green Algorithms work thanks to the support of the Wellcome green-algorithms.org/join-us/

EMBL-EBI Training (@ebitraining) 's Twitter Profile Photo

Polygenic scores can predict an individual’s genetic predisposition to certain traits or diseases. Join our #webinar learn how to use the PGS calculator for calculating polygenic scores. Registration is free but essential: ebi.ac.uk/training/event… #genomics EMBL-EBI PGS Catalog

Polygenic scores can predict an individual’s genetic predisposition to certain traits or diseases. Join our #webinar learn how to use the PGS calculator for calculating polygenic scores. Registration is free but essential: ebi.ac.uk/training/event… #genomics <a href="/emblebi/">EMBL-EBI</a> <a href="/PGSCatalog/">PGS Catalog</a>
PGS Catalog (@pgscatalog) 's Twitter Profile Photo

📣 Thrilled to announce our collaborative tutorial with EMBL-EBI Training! Dive into the world of polygenic scores and explore the PGS Catalog resources (including pgsc_calc) - ideal for those seeking a comprehensive yet quick overview. Access it online at buff.ly/CEBWMio!

📣 Thrilled to announce our collaborative tutorial with <a href="/EBItraining/">EMBL-EBI Training</a>! Dive into the world of polygenic scores and explore the PGS Catalog resources (including pgsc_calc) - ideal for those seeking a comprehensive yet quick overview. Access it online at buff.ly/CEBWMio!
PGS Catalog (@pgscatalog) 's Twitter Profile Photo

Discover data from our latest release: - New PGS for atrial fibrillation (pgscatalog.org/publication/PG…) - PGS optimised for East Asian ancestry in cancer (pgscatalog.org/publication/PG…) and 10 other common diseases (pgscatalog.org/publication/PG…) Submit data at pgscatalog.org/submit

Discover data from our latest release:  
- New PGS for atrial fibrillation (pgscatalog.org/publication/PG…)  
- PGS optimised for East Asian ancestry in cancer (pgscatalog.org/publication/PG…) and 10 other common diseases (pgscatalog.org/publication/PG…)  

Submit data at pgscatalog.org/submit
PGS Catalog (@pgscatalog) 's Twitter Profile Photo

Interested in calculating polygenic scores in the All Of Us workbench? Take a look at our new documentation for how to run pgsc_calc in the cloud environment: pgsc-calc.readthedocs.io/en/latest/how-…. Very much a work-in-progress, optimisations incoming!