Dr. Kirsten J Harper
@kirstenjharper
Post-doc at the University of Edinburgh working on #marine and #terrestrial #eDNA. Views my own. She/Her.
ID:539941622
29-03-2012 12:35:56
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Moving towards routine taxonomic inventorying using #nanopore sequencing from #metaprobe samples on #seagrass ! Fab work by Ethan Ross !
#UKDNAWG24
First up, Jake Jackman discussing #eDNA as alternative method for surveying 🐟 on the Mersey & understand hydrological processes on transport of eDNA. All sampling methods tried worked well so eDNA feasible. Found 🧬 moves far into estuary. Helps to interpret findings #UKDNAWG24
Katie Clark from Natural England sharing the goals of creation & optimisation of airborne #eDNA samplers. Want to develop new methods to survey terrestrial biodiversity in low cost, efficient way. Need help so asking community what they need & what can they do for you #UKDNAWG24
Katherine Lester discussing gaps in reference database for soil fauna. Plenty specimens so why the gaps? Goal is to sequence species and begin filling gaps #UKDNAWG24
Some very cool Irish #lake #sedDNA results from Andrew Tighe going back ~10,000 years 🐗🐺🦌🐂 but those pesky #otters are still eluding detection even from sediment cores! Keep an eye out for the publication 👀 #UKDNAWG24
Amy Thorpe discussing use of sedimentary DNA to reconstruct past microbial community dynamics. Compared sedDNA & microscopy. Able to track community trends over time & found increases tracked w/ onset of eutrophication. Each method also detected distinct communities #UKDNAWG24
Another sparkling speedtalk session containing #eDNA from water and land from remote #islands , Mediterranean #cetaceans , #sponge #nsDNA , and #bioinformatic advances!
Dr. Kirsten J Harper Chloé Fernandez Gert-Jan Jeunen Rosie Dowell #GeorgeRoderick .
#UKDNAWG24
Dr. Kirsten J Harper shows #eDNA bounty of the Pitcairn Islands. Over 40 species detected from just 11 pilot samples that show expected associations with depth and habitat. Remaining samples to be sequenced with multiple markers and another sampling expedition next year #UKDNAWG24