Our paper on neoantigen evolution is out! nature.com/articles/s4158… A great collaboration with Trevor Graham Marc Williams Jacob H William Cross Luis Zapata Sandy Anderson Ryan O Schenck Chandler Gatenbee Andrea Sottoriva CSSB Lab Benjamin Werner More in thread:

Our work on the immunogenomic landscape of hematological malignancies out in the latest Cancer Cell (open access link: authors.elsevier.com/c/1bkpH5TA51TH…), with a nice commentary by Davide Bedognetti: doi.org/10.1016/j.ccel… Petri Pölönen Merja Heinäniemi HRUH hematology

Nice to see our work published where we characterised the genomics of pre-malignant skin lesions. Good work by Jason Thomson @FindlayCopley Barts Cancer Institute (Queen Mary) Blizard Institute

Very pleased to present our latest tool in Patterns, a Cell Press journal, led by Chinedu Anthony Anene. It uses deep neural network to decompose transcriptomics into multivariable pathway activities and identify unknown pathway components. #MachineLearning #GEPs @FindlayCopley Barts Cancer Institute (Queen Mary) cell.com/patterns/fullt…

We are hiring two bioinformaticians working in the field of squamous cancers, genomics / transcriptomics, single cell omics, machine learning, biomarkers Barts and The London, Queen Mary Barts Cancer Institute (Queen Mary) Blizard Institute webapps2.is.qmul.ac.uk/jobs/job.actio… webapps2.is.qmul.ac.uk/jobs/job.actio… please RT

There is still time to apply for this exciting bioinformatics post to work on the multiomics data of cutaneous SCC research Barts Cancer Institute (Queen Mary) in collaboration with cutaneous research Blizard Institute . Please RT! jobs.ac.uk/job/CMY284/bio…

.Volodymyr Zelenskyy / Володимир Зеленський's tv address to the Russian (!) people might be the most moving speech that I've ever seen in my entire life. The whole world needs to see, understand and share this crucial Ukrainian message. #StandWithUkraine #Ukraine #Україна #Russia #Россия

📢 Apply for a #PhD studentship in Dr Jun Wang's group at BCI - 'Elucidating the genomic determinants and genetic circuits of immune cell infiltration and evasion in squamous cancers.' ➡️ bartscancer.london/about/vacancie… App deadline: 31 May #CancerResearch #Bioinformatics #DataAnalytics

We are excited to launch a brand new MSc programme in #Cancer Genomics and Data Science at Barts and The London, Queen Mary Queen Mary University of London. Could this be the #MSc programme for you? Find out more from Programme Director, Dr Jun Wang ⬇️ bartscancer.london/study-at-bci/p… #DataScience #DataAnalytics #PostgradStudy

📢 Come along to our virtual open event on 20 July to find out more from the Programme Director, Dr Jun Wang Jun Wang, and have the opportunity to ask some questions. Register now ➡️ bartscancer.london/event/bci-msc-… #Cancer #Genomics #DataScience #Bioinformatics #DataAnalytics (4/4)

I want to support ambitious postdocs to reach the next level of their career. Join me CRUK Cambridge Institute ! 3 postdoc positions - chromosomal instability - perturbation networks - computational pathology More info at markowetzlab.org/positions.php please RT

Come to our virtual open event tomorrow to find out more about the programme from Programme Director Dr Jun Wang Jun Wang, hear from 2 Postdoctoral Bioinformaticians about their experiences working within the field, & to ask some Qs! Register: bartscancer.london/event/bci-msc-… (3/3)

There is still time to apply for this cancer bioinformatician post at Barts Barts Cancer Institute (Queen Mary). Come work with us to work on cutting edge cancer research and data analytics. Deadline 16th Aug. Please help RT qmul.ac.uk/jobs/vacancies…

Excited to share our Cancer Cell article presenting a pan-cancer integrative histology-genomic analysis, multimodal integration improves prognostic models, discovers molecular & morphologic correlates of prognosis. bit.ly/3PbnUVM Harvard Medical School Brigham and Women's Pathology Broad Institute 1/2

Great to share IBRAP, an integrated benchmarking single cell RNA-seq pipeline, allowing researchers to determine the optimal pipeline combinations for their data, great for integrating lots of samples. bit.ly/3ZCnMEB. Led by Connor Knight, Jessica Okosun Uppy Gill

We are looking for someone with bioinformatics, computational bio, genomics, analytic background who are passionate about AI and data science and application in biomedical research, as part of the UKRI/BBSRC AI for Drug Discovery Programme. Barts Cancer Institute (Queen Mary) Barts Centre for Squamous Cancer pls RT!

Preprint alert "Non-coding mutations at enhancer clusters contribute to pancreatic ductal adenocarcinoma" biorxiv.org/content/10.110… It is the work of Min Patel an outstanding MRC PhD jointly supervised by Jun Wang & Pradeepa Madapura Barts Cancer Institute (Queen Mary) Blizard Institute

Great to see this work out. Great teamwork of dermatologists, pathologists, biologists and bioinformaticians. Now we need to test this signature in independent diverse cohorts. Barts Cancer Institute (Queen Mary) Barts Centre for Squamous Cancer #cutaneousSCC #metastasis

Thrilled to share our study where we define transcriptomic and immune subtypes of esophageal squamous cell carcinoma. We also develop a histology AI model that identifies specific histological features for each group. Barts Cancer Institute (Queen Mary) Barts Centre for Squamous Cancer Nature Communications nature.com/articles/s4146…

I'm very grateful for CRUK to fund this research. #squamouscancer #metastasis #multimodal #biomarker Barts Cancer Institute (Queen Mary) Barts Centre for Squamous Cancer