🔥The 9th Round of Easy Loan, Earn $40 Reward is in progress❗️ ⏰ Promotion Period: January 15th - Feburary 15th, 2025 👉 Register now and check more details at gate.io/campaigns/358

Since the # of "[α-ω](fold){0,1}[A-z]*" tools are getting out of hand, I tried to curate a lil list of the ones I'm aware of: github.com/sacdallago/fol… Peeps w/ overview Sergey Ovchinnikov @thesteinegger Kevin K. Yang 楊凱筌 feel free to contribute if I missed stuff?

Is ColabFold's MMseqs2-based MSA generation protocol suitable for mutational outcome prediction? Yes! Joint work by Marina and Céline Marquet. 1/2

Mar 03 - Oberseminar: This is only a test tinyurl.com/2jvkknwh

We (@lindner_seb, Michael Heinzinger) introduce REXzyme, a new model for the generation of enzymes that catalyze user-defined chemical reactions. We'd like that the community can benefit as soon as possible from it, so we made it available in HuggingFace: huggingface.co/AI4PD/REXzyme.

Our new bilingual protein language model (pLM), ProstT5, translates between protein sequence and structure. Besides producing more structure-aware embeddings that are better at remote homology detection than sequence-pLMs, its translation capability enables inverse folding.

Very happy to introduce VespaG, for ultra-fast and accurate prediction of protein mutational effects. github.com/JSchlensok/Ves…. Big thanks to @LiniMuc, Julius Schlensok, and Marina for the great work and effort. Exciting collab with RostLab 1/5

Introducing ProtSpace: a tool for visualizing protein embeddings in 2D/3D! 🎨 biorxiv.org/content/10.110… Try it: 📦github.com/tsenoner/prots… 🌐protspace.rostlab.org #Proteomics #DataViz