🔥The 9th Round of Easy Loan, Earn $40 Reward is in progress❗️ ⏰ Promotion Period: January 15th - Feburary 15th, 2025 👉 Register now and check more details at gate.io/campaigns/358

Thrilled to release 🌟STaRK 🌟 - A large-scale LLM retrieval benchmark on semi-structured knowledge bases. While LLMs excel at reasoning and semantic retrieval, they struggle with more complex tasks. Especially when real-world user queries require a combination of unstructured

The Illustrated AlphaFold bit.ly/the-illustrate… Do you want to know how AlphaFold3 works? It has one of the most intimidating transformer-based architectures, so to make it approachable, we made a visual walkthrough inspired by Jay Alammar's Illustrated Transformer! 🧵 (1/7)

ADMET-AI is now published in Bioinformatics! ADMET-AI provides free, fast, & accurate prediction of absorption, distribution, metabolism, excretion, & toxicity properties of molecules at admet.ai.greenstonebio.com Blog: portal.valencelabs.com/blogs/post/adm… Paper: academic.oup.com/bioinformatics…

📢#AI predicting molecule properties to guide drug discovery. Our updated ADMET-AI paper is now published: 📰 Paper: academic.oup.com/bioinformatics… 🌐 Interactive website admet.ai.greenstonebio.com Great job led by Kyle Swanson, Rabindra Shivnaraine in collaboration with Greenstone Biosciences!

I'm excited to share our Nature Methods primer on language models for biological research. Elana Simon, James Zou, and I explain how to use language models, both natural language models and biological language models, to accelerate biological research. nature.com/articles/s4159…

Very excited to share our primer on LLM for biology Nature Methods! We discuss how to use: ⚡️human & protein LMs (eg #ESM) ⚡️#singlecell & #multimodel LMs ⚡️when to fine-tune, transfer learn etc. Paper nature.com/articles/s4159… Colab tutorial colab.research.google.com/drive/1zIIRGeq… Written for a

Very cool The New Yorker article by Dhruv Khullar on AI for antibiotic discovery. Thank you for covering some of our work with Jon Stokes and James Zou! References below. Chemprop: cell.com/cell/fulltext/… SyntheMol: nature.com/articles/s4225… newyorker.com/magazine/2024/…

📢 Excited that #unitox is selected as a #NeurIPS2024 spotlight!💡 We created #LLM agent to analyze >100K pages of FDA docs from all approved drug ➡️ new database annotating 8 toxicity types for 2400 drugs. Validated by clinicians. openreview.net/pdf?id=Vb1vVr7… Data

Thank you Kevin Roose for highlighting SyntheMol! SyntheMol is our generative AI model for drug design that ensures easy synthesis of generated molecules, allowing us to rapidly identify six AI-designed molecules with promising antibiotic activity. nytimes.com/2024/12/30/tec…

Our latest review, "Next-Gen Therapeutics: Pioneering #DrugDiscovery with #iPSCs, #Genomics, #AI, and Clinical Trials in a Dish", is out in Annual Reviews! annualreviews.org/content/journa… Congrats to Zehra Yildirim Kyle Swanson James Zou Stanford CVI Greenstone Biosciences

Our new paper in Circulation shows how #ADMET-AI predicts cardiotoxicity of drugs and generates interpretable insights ahajournals.org/doi/abs/10.116… Great collaboration w/ Joseph C Wu, MD, PhD Greenstone Biosciences led by Souhrid Mukherjee and Kyle Swanson 👏

ADMET-AI accurately predicts drug-induced cardiotoxicity and allows interpretation via most important ADMET properties: implications in cardiovascular drug discovery Joseph C Wu, MD, PhD Souhrid Mukherjee Kyle Swanson James Zou Parker Walther Rabindra Shivnaraine Paul Pang ahajournals.org/doi/full/10.11…

Very cool work from Jaanak Prashar, Yusuf Roohani, and others at the Arc Institute!

Our MIT class “6.S184: Introduction to Flow Matching and Diffusion Models” is now available on YouTube! We teach state-of-the-art generative AI algorithms for images, videos, proteins, etc. together with the mathematical tools to understand them. diffusion.csail.mit.edu (1/4)

>700K people die each year due to S. aureus infection. Today we show that our AI designed new molecule, synthecin, stops drug-resistant S. aureus MRSA in mouse model💊 We created synthecin w/ SyntheMol-RL, our new RL generative AI. All open source biorxiv.org/content/10.110…