Large-scale analysis of whole genome sequencing data from formalin-fixed paraffin-embedded cancer specimens demonstrates preservation of clinical utility. #WGS #FFPE #CancerSamples Nature Communications nature.com/articles/s4146…

The first Chromosomal-level genome assembly of Sageretia thea using Nanopore long reads and Pore-C technology. #MockBuckthornGenome #ChromosomeLevelAssembly Oxford Nanopore #Sequencing #PoreC Scientific Data nature.com/articles/s4159…

Chromosome-level genome assembly of predatory Arma chinensis. #ArmaChinensisGenome #ChromosomeLevelAssembly Scientific Data nature.com/articles/s4159…

Continuous multiplexed phage genome editing using recombitrons. #PhageGenomeEditing Nature Biotechnology nature.com/articles/s4158…

A framework for sharing of clinical and genetic data for precision medicine applications. #ClinicalData #GeneticData #DataSharing #PrecisionMedicine Nature Medicine nature.com/articles/s4159…

Global impact of unproductive splicing on human gene expression. #UnproductiveSplicing #GeneExpression Nature Genetics nature.com/articles/s4158…

Exploring the structural landscape of DNA maintenance proteins. #DNAmaintenanceProteins Nature Communications nature.com/articles/s4146…

Long-read RNA-seq demarcates cis- and trans-directed alternative RNA splicing. #AlternativeSplicing #LongRead #Sequencing bioRxiv biorxiv.org/content/10.110…

🙌 ELIXIR has published its position paper on Framework Programme 10, the next seven-year EU programme for research. The position paper summarises ELIXIR’s recommendations to ensure that #researchinfrastructures enable science in Europe to thrive. 🔗 elixir-europe.org/fp10-position-…

There’s still time to join tomorrow’s #webinar about technological advances in spatial transcriptomics. Registration is free but essential ebi.ac.uk/training/event… #bioinformatics #DataScience #spatialomics #singlecell vlorenzi

Apply for funding for internationally collaborative projects to understand the drivers of infectious disease transmission in animals, humans and plants. Find out more, including details of a webinar for potential applicants on 25 September: orlo.uk/QpzNE

ROBIN: A unified nanopore-based sequencing assay integrating real-time, intraoperative methylome classification and next-day comprehensive molecular brain tumour profiling for ultra-rapid tumour diagnostics. #BrainTumorDiagnostics Oxford Nanopore #Sequencing medrxiv.org/content/10.110…

Bin2cell reconstructs cells from high resolution visium HD data. #SpatialTranscriptomics #Bioinformatics academic.oup.com/bioinformatics…

CSV-Filter: a deep learning-based comprehensive structural variant filtering method for both short and long reads. #StructuralVariants #VariantFiltering #Bioinformatics academic.oup.com/bioinformatics…

Batch-effect correction in single-cell RNA sequencing data using JIVE. #SingleCell #scRNAseq #BatchEffectCorrection Bioinformatics Advances academic.oup.com/bioinformatics…

Variable calling of m6A and associated features in databases: a guide for end-users. #m6A #RNAmethylation Briefings in Bioinformatics academic.oup.com/bib/article/25…

Comprehensive assessment of long-read sequencing platforms and calling algorithms for detection of copy number variation. #LongRead #Sequencing #VariantCalling #CopyNumberVariations #CNVs Briefings in Bioinformatics academic.oup.com/bib/article/25…

Come join ⁦AstraZeneca⁩ in Barcelona as Director, Translational Bioinformatics A great opportunity. Want to know more check out the role at LinkedIn. linkedin.com/posts/sophie-b…

PerturbDB for unraveling gene functions and regulatory networks. #CRISPR #SingleCell #scRNAseq #GeneFunction #RegulatoryNetworks Nucleic Acids Res academic.oup.com/nar/advance-ar…

Disentangling river and swamp buffalo genetic diversity: initial insights from the 1000 Buffalo Genomes Project. #BuffaloGenomes #SwampBuffaloGenome #ChromosomeLevelAssembly GigaScience academic.oup.com/gigascience/ar…