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We will add a new evaluation feature to enviPath shortly - Multi-Generation Evaluation. Our preprint is available ChemRxiv: doi.org/10.26434/chemr…

new: "Holistic evaluation of biodegradation pathway prediction: assessing multi-step reactions and intermediate products" jcheminf.biomedcentral.com/articles/10.11…

EAWAG-SLUDGE, our latest addition to the enviPath database, is now available at envipath.org/package/4a3cd0…. It features biodegradation pathways and kinetic information for 91 micropollutants commonly detected in wastewater treatment plants.

Announcing two positions to make enviPath THE ORD resource on contaminant biotransformation, to be filled ASAP, at @UZH & Eawag. Research assistant in chemical data science: tinyurl.com/mbbuaxn7 Postdoc in Computational Metabolomics: tinyurl.com/5h8k9w5c

Join us at ICCE 2023 in Venice! We are planning a satellite event at ICCE 2023 - we will introduce enviPath, with theory sessions and hands-on exercises. We will also have an exciting list of speakers! Register now - more updates soon! icce2023.com/satellite-even…

Application deadline approaching for two positions to further develop enviPath, our internationally unique online resource on contaminant biotransformation. Assistant in chemical data science: tinyurl.com/mbbuaxn7 Postdoc in Computational Metabolomics: tinyurl.com/5h8k9w5c

How do we identify and overcome over-specialization #bias in chemical databases? Check Katharina Dost's latest publication, joint work with Zac Pullar-Strecker, Liam Brydon, Kunyang Zhang, Jasmin Hafner, and Pat Riddle. #cheminformatics dx.doi.org/10.1186/s13321… jcheminf.biomedcentral.com/articles/10.11…

new: "Combatting over-specialization bias in growing chemical databases" jcheminf.biomedcentral.com/articles/10.11…

Our new automatic rule extraction tool enviRule - extract transformation rules directly from your data set. Soon available in enviPath: doi.org/10.1093/bioinf…

Just presented this overview at the enviPath workshop on behalf of Tiejun, Evan Bolton and life and LCSB-ECI teams. #OpenScience #cheminformatics Luxembourg Centre for Systems Biomedicine Luxembourg National Research Fund (FNR) ZeroPM Reaction Data in life Slides: zenodo.org/record/8143832 Sneak peek (lots of hyperlinks):

Throwback Tuesday! As part of the enviPath+ project, we aim to bring the enviPath platform to a new level. We held a scoping workshop in July to understand how to best meet the needs of our users and collaborators. We thank the participants for their valuable inputs!

Throwback Tuesday! The whole enviPath team was present at the International Conference on Chemistry and the Environment 2023 in Venice. We organized a workshop around the enviPath platform, featuring talks regarding databases, predictive models, and applications of enviPath.

enviPath It was great to be there (so many familiar faces) - here's the link to our slides with life & LeeC Shapiro doi.org/10.5281/zenodo…

New publication alert! ‘Combining predictive and analytical methods to elucidate pharmaceutical biotransformation in activated sludge’ pubs.rsc.org/en/content/art…

New publication alert! “enviRule: an end-to-end system for automatic extraction of reaction patterns from environmental contaminant biotransformation pathways” academic.oup.com/bioinformatics…

New data package: EAWAG-SLUDGE ! EAWAG-SLUDGE contains biotransformation data from activated sludge experiments extracted from 27 scientific articles, including our own paper by Trostel et al. (2023) envipath.org/package/7932e5…

New publication alert! 'Systematic Handling of Environmental Fate Data for Model Development─Illustrated for the Case of Biodegradation Half-Life Data' pubs.acs.org/doi/10.1021/ac…

New publication alert! 'Making waves: Enhancing pollutant biodegradation via rational engineering of microbial consortia' sciencedirect.com/science/articl…

enviPath was first published in 2016. Since then, we have introduced substantial functionality enhancements and updates.We’ve summarized these advancements in our latest update paper. Check it out here: ncbi.nlm.nih.gov/pmc/articles/P…