Meet (Hari) Harikrushnan Balasubramanian, one of the members of I2 👇

Many thanks to the HHMI | Janelia Lab Coordinators for another wonderful Cookie Party! The AIC at Janelia / Integrative Imaging @ Janelia team had a ton of fun!

#ASCB For those interested in nuclei and/or epithelial remodeling… Rashmi’s presenting a nice story on nuclear positioning at 1:30 Monday (P2047/B360) and Liam is exploring the impact of cell density 1:30 Tuesday (P2759/B376). See you in SD! #cellbio2024

Here we go again 😊

1/2 pre-prints to end the year! Synthetic Physiology Lab is happy to present *CALIPERS: Cell cycle-Aware Live Imaging for Phenotyping Experiments and Regeneration Studies* led by @moisesdisante and in collaboration with the amazing Alessandro Bertero and Florian Jug labs biorxiv.org/content/10.110…

Very happy to have a small part in this new paper from Hari Shroff's lab on aberration compensation using deep learning. I got to bench mark it against traditional wavefront sensing methods and it performs quite well! More here: nature.com/articles/s4146…

Improving contrast & resolution of fluorescence microscopy by compensating aberrations with a deep learning approach 📷: Min Guo et al Zhejiang University NIBIB in Nature Communications ➡️: bpod.org.uk/archive/2025/1…

🔬 The Shroff Lab & collaborators have developed a new AI method that produces sharp microscopy images throughout a thick biological sample without using adaptive optics, adding additional hardware, or taking more images. 🔗janelia.org/news/new-ai-te…

Join me, Talley Lambert, Florian Jug, Beth Cimini 🔬💻 📊 & Hunter Elliott for our two week CSHL course on microscopy & image analysis starting March 24, 2025! Applications are due 1/31/25. meetings.cshl.edu/courses.aspx?c…

HD2Net: A Deep Learning Framework for Simultaneous Denoising and Deaberration in Fluorescence Microscopy Xuekai Hou, Yue Li, Chad M. Hobson, Hari Shroff, Min Guo and Huafeng Liu biorxiv.org/content/early/…

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(rt) HD2Net: A Deep Learning Framework for Simultaneous Denoising and Deaberration in Fluorescence Microscopy biorxiv.org/cgi/content/sh… #biophotonics #biomedicaloptics

Few companies epitomize transformative potential of university-driven entrepreneurship like Redbud Labs. From Richard Superfine’s research into physics of mucus clearance in lungs, it launched Redbud NA1, an automated device 4 molecular diagnostics. Story: bit.ly/4ap3zc0

Applications for our Quantitative Imaging From Acquisition: to Analysis 2025 course Quantitative Imaging (Mar 24-Apr 8) are due on Jan 31! . Come immerse yourself in microscopy and image analysis with me, Talley Lambert, Florian Jug, Beth Cimini 🔬💻 📊 & Hunter Elliott! Please RT! CSHL Courses

Linvill et al find that, in early #Drosophila embryo germband extension, cell junctions systematically rotate from a horizontal towards a vertical orientation. Rotating interfaces acquire myosin & newly initialized contractile identities hubs.la/Q033Ln-J0 Blankenship Lab

Imaging South East Asia (iSEA) is launched! Well done and congratulations to all involved so far. Check out the new website here: lnkd.in/gPjyQASH Follow iSEA here: LinkedIn: Imaging Southeast Asia_iSEA X: Imaging Southeast Asia_iSEA

A new pre-print for LSFM lovers in the bioimaging community: researchsquare.com/article/rs-585… w. python + napari. We would love to hear your feedbacks. Thanks for the Peng Lab in Helmholtz Munich and the Huisken Lab in Göttingen for having us along the journey in this great collaboration.

Glad to have you all here for the last two weeks, a truly fun project one a part of!

Rectification of planar orientation angle switches behavior and replenishes contractile junctions, say Katie Linvill, Liam Russell, Timothy Vanderleest, Todd Blankenship Blankenship Lab, Dinah Loerke et al. University of Denver: hubs.la/Q033Lb6M0 #Adhesion #Development #Drosophila

Hiring alert! Sanjay Srivatsan Fred Hutch Cancer Center and I HHMI | Janelia are looking for a joint postdoc to combine single-cell omics and ex utero embryogenesis. Please retweet! If you are interested, DM us or send an email to [email protected] ; [email protected]