Another excellent talk by Viacheslav Mylka on comparative analysis of sample multiplexing methods for #SingleCell #RNAseq . The symposium continues! Day 1 of 2! Università di Firenze Florence, Italy

when actor and his movie character share the same values

Seurat & Scanpy estimate very different fold changes. Example 2: x.com/Sanbomics/stat… Example 3: x.com/slavov_n/statu… Let's compare their estimates to fold changes estimated by FISH. Do we have good comparisons / datasets ?

Did you know that #SpatialTranscriptomics allows for identification of hundreds or even thousands of genes - including their spatial location? 📖 Learn more about this #technology in our latest blog written by in-house expert Dr. Viacheslav Mylka 🇺🇦 👉 eu1.hubs.ly/H05YJ4h0 #omics

russians already killed more than 75 Ukrainian scientists since the 24th of Feb 2022

We compared six commercial + academic multiplexed in-situ gene expression profiling technologies. Check out our preprint, led by Austin Hartman. Takeaway when evaluating spatial tech: consider both sensitivity and specificity! biorxiv.org/cgi/content/sh…

An appropriate differential expression analysis in single-cell data depends on the study design buff.ly/3SfUQRY

1/11 Check out our preprint introducing Nova-ST, a high resolution, spatial barcoding workflow developed by repurposing Illumina’s NovaSeq 6000 S4 flow cells for spatial transcriptomics profiling. biorxiv.org/content/10.110…

Micro/nano plastics were found in carotid plaques from the majority of patients. The levels of plastics were strongly associated with inflammatory cytokines & increased risk myocardial infarction, stroke, or death. => Reconsider the use of plastics. nejm.org/doi/pdf/10.105…

As always - a great conference! @VIBConferences VIB

youtube.com/live/GGS7DpvZv…

Regulation of Acid-base by renal Epac isoforms attracted the attention during #APS2024 organized by American Physiological Society Was able to thank to those who Stands with Ukraine.

1/7 Here is a technical update for the latest release of the #SpatialData package from last week. We thank the core developers and contributors for helping us refine the framework, and the users for the precious feedback and discussions. GitHub repository: github.com/scverse/spatia…

Computational Approaches and Challenges in Spatial Transcriptomics - PMC ncbi.nlm.nih.gov/pmc/articles/P…

💡 Want to learn more about #spatial omics technologies? You're in luck: together with PixelgenTech, on May 29th we are offering a #webinar to answer your burning questions about how spatial #omics can deepen your biological understanding 👉eu1.hubs.ly/H08J6Lp0

On May 29th I will be talking about novel approaches in spatial transcriptomics data analysis. Join the webinar if you are interested 👇

an example of moral bankruptcy in academia? the researchers from UK and AUS argue that Ukraine should be thrown under the bus to focus on "bigger" issues. apparently military assistance to UK in 1940 was waste of resources according to the profs. The University of Manchester

When you're on holiday and nature reminds you of your work. #cellSegmentation is one of the biggest challenges in the analysis of #SpatialTranscriptomics data.