Extremely grateful to share with you our last work, my second (co)first author paper of my PhD! We described non-canonical splicing between exons and transposable elements as source of MHC-peptides and neoantigens in tumors! Some results below!⬇️⬇️ science.org/doi/10.1126/sc…

Yesterday we finished the first module on #SupervisedLearning of our #MachineLearning seminar. Now we are excited to continue with the second module about #UnsupervisedLearning. We are already thinking about possible applications in our respective fields💻🧠

Happy to contribute :)

Congrats ITAGs for the pioneering work on immunogenicity of non-canonical tumor antigens🙌🏾 Happy to have contributed at the beginning learning about #MSdenovoseq and #nonCs🤯 #protegenomics and lots of #Tcell assays made it work🚀 Thanks to Alena Gros #marialozano Vall d’Hebron Institute of Oncology (VHIO)

A killer T cell of the immune system destroying a monstrous ovarian cancer cell. Credit: Alex Ritter, PhD

Inspiring talks & UX at #eacrImmunoOncology Here #PredIG, an explainable ML predictor of T-cell Epitope #immunogenicity will soon be out in both user-friendly and container versions. EACR EAPM-BSC Eduard Porta Alena Gros Seoane Lab yardena samuels BSC-CNS

Great UX #SEI2023 #Bilbao We explained our immunoinformatic models #PredIG #NOAH #NetCleave to immunologists in Spain In a #cancer cohort from IrsiCaixa, we refined from 170K potential #neoantigens to a TOP15/patient🤯 SEInmunología EAPM-BSC Eduard Porta BSC-CNS

Are you a computational scientist passionate about #AI, #ProteinEngineering, and #DrugDesign? Join us at BSC-CNS for an exciting #PhD journey! 🚀 Craft innovative #AI code in our cutting-edge #HPC center, and contribute to impactful projects!🌍💻 More: shorturl.at/cmtuZ

Congrats Roc! Happy to have helped you in developing this very nice tool :)

Happy to chalk the whiteboard at London Quantitative Immunology day (my first ever) !! We shared our implementation of #Brewpitopes (BSC-CNS EAPM-BSC Eduard Porta ) on an early lung cancer detection study here at @UCL Kevin Litchfield Thanks Andreas Tiffeau-Mayer Yuta Nagano 🙌🙌

6 months in London at Kevin Litchfield lab UCL Cancer Institute UCL have been highly stimulating. Came with 1 project, left with 5 😂 and learned loads in the process. Now, happily back to BSC-CNS EAPM-BSC Thanks EACR for the fellowship! Cheers to all 4th floorers! See u soon 🙌

📍Cancer Genomics, Multiomics & CompBio 🙌 EACR 🔎#NIMBLE: early lung cancer detection clinical trial UCL Cancer Institute 🖥️#BREWPITOPES: we designed a surface-accessible epitope panel to capture early LUAD antibody signatures. Kevin Litchfield Eduard Porta EAPM-BSC BSC-CNS

So excited to share that our paper on the ever-elusive Langerhans cell is out now! Using a combo of in vivo models and RNAseq we have been able to identify some of the intrinsic and extrinsic signals that drive LC identity. Check it out! Clare Bennett