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Preliminary findings and interesting data could be shared instantaneously with collaborators across the globe. This will never happen without top down organization. It would require equipment on the ground, computational clouds, ... 14/x

... full time data scientists and professionals, thousands - maybe millions of lines of code, and training. In particular, scientists will have to be re-trained to be more collaborative, more open, and more rigorous in detailing exactly how to reproduce their work. 15/x

This is an infrastructure project. Join us gopetition.com/petitions/a-un… Anshul Kundaje (anshulkundaje@bluesky) Melissa Haendel 16/16

Full details of how #LRAGSP Challenge 1 will be evaluated in thread below. See link for more info.

GENCODE are excited to support international community efforts to produce reference annotation for human ORFs discovered by Ribo-seq. Preprint: bit.ly/2Ty4Mdo Website text: bit.ly/3iCFiX0

Interested in analyzing chromatin modifications and binding patterns of transcription factors and other proteins? Check out the ENCODE ChIP-Seq Pipeline 2 released on the Seven Bridges Cancer Genomics Cloud platform. ENCODE Project ENCODE DCC

Interested in genome-wide profiles of chromatin accessibility? Perform quality control and signal processing to produce alignments and measures of enrichment with the ENCODE ATAC-seq Pipeline, released on the Seven Bridges Cancer Genomics Cloud platform. ENCODE Project ENCODE DCC

Today we reached 130,000 #cellline entries in the #Cellosaurus. We tried to find a good image representing that number and found this picture of 130,000 spectators attending a mega concert of Madonna on August 29, 1987 at Parc de Sceaux near Paris

I don’t think the long read community realizes how long PacBio cDNA reads can be with the right protocol & much higher quality thanks to CCS. The final ENCODE Project long read dataset for human and mouse will be a treasure trove for the community!

#TBT! ENCODE started in September 2003 and is now in its final stages in September of 2021! 18 years of science and innovation have taken place thanks to the ENCODE team and NHGRI #ENCODE #science #genomics #humangenome #NHGRI

This is super important

Model organism databases are in jeopardy | Development | The Company of Biologists journals.biologists.com/dev/article/14…

Supporting Talented Early Career Researchers in Genomics RFA-HG-22-001 grants.nih.gov/grants/guide/r…

**RFA Announcement** Supporting Talented Early Career Researchers in Genomics RFA-HG-22-001 For more information: ow.ly/7kTc50H6bZq

Looking forward to seeing everyone (virtually) and hearing about all the exciting new research at the 4DNucleome annual meeting today! DCIC demo session tomorrow (Thursday) at 11:53am PST!

Are you running the data or are you run over by petabytes of data? These ten simple rules will help you to tame large-scale datasets. Read more: ow.ly/BnnS50HUP3U Arkarachai Fungtammasan, PhD #bioinformatics #genomics #BigData

Read about the 4DNucleome data portal, now out in Nature Communications #FAIRdata nature.com/articles/s4146…

Does anybody know if chromatin segmentation (either ChromHMM or Segway) for NIH3T3 cells is available? I admit I’m not able to find it (mm10, possibly)

x.com/NCICancerCtrl/…

Excited to announce that "The EN-TEx resource of personal epigenomes & variant impact models" just came out: Cell.com/cell/fulltext/…. The paper represents the culmination of many years of work by >100 authors & has lots of useful information about allele-specific activity.