Yan Xu (@yanxu_cincy) 's Twitter Profile
Yan Xu

@yanxu_cincy

Divisions of Pulmonary Biology and Biomedical Informatics
Cincinnati Children's Hospital @CincyChildrens; @cincyinformatix; @lungmapnet

ID: 2979319365

calendar_today15-01-2015 04:14:14

43 Tweet

58 Followers

28 Following

Yan Xu (@yanxu_cincy) 's Twitter Profile Photo

Bridges et.al applied integrated RNA-seq, ATAC-seq, and scRNA-seq data in mice to identify novel cellular and molecular mechanisms by which glucocorticoids control prenatal lung maturation. May-27-2020 AJP-Lung Cellular and Molecular Physiology (journals.physiology.org/doi/abs/10.115…); Cincinnati Children's Biomedical Informatics

Broad Institute (@broadinstitute) 's Twitter Profile Photo

A new Cell paper documents how rare, high-impact and common, low-impact genetic variants work together to influence blood cell development. #hematopoiesis broad.io/GeneticBloodDi…

A new <a href="/CellCellPress/">Cell</a> paper documents how rare, high-impact and common, low-impact genetic variants work together to influence blood cell development. #hematopoiesis broad.io/GeneticBloodDi…
Lappalainen Lab (@tuuliel_lab) 's Twitter Profile Photo

Very happy and proud to present: The GTEx papers. This set of 15 papers published today describes the final phase of this 10-year effort, providing the genomics community an atlas of genetic regulatory variants and a deep dive into the biology behind it. sciencemag.org/collections/ge…

Very happy and proud to present: The GTEx papers. This set of 15 papers published today describes the final phase of this 10-year effort, providing the genomics community an atlas of genetic regulatory variants and a deep dive into the biology behind it. sciencemag.org/collections/ge…
Erik Bao (@erik_bao) 's Twitter Profile Photo

Now online @nature! Myeloproliferative neoplasms have one of the highest familial risks among cancers, but what drives this? Biobank-level GWAS and functional analyses implicate HSC function. Huge team effort w/Satish Nandakumar, Xiaotian, Vijay Sankaran nature.com/articles/s4158… 1/n

Now online @nature! Myeloproliferative neoplasms have one of the highest familial risks among cancers, but what drives this? Biobank-level GWAS and functional analyses implicate HSC function. Huge team effort w/<a href="/neuron81/">Satish Nandakumar</a>, <a href="/xiaotianliao/">Xiaotian</a>, <a href="/bloodgenes/">Vijay Sankaran</a> nature.com/articles/s4158… 1/n
Naftali Kaminski (@kaminskimed) 's Twitter Profile Photo

Our Editorial “Towards a Cell Atlas of the Human Airway” is finally in print - Jonas Schupp, Xiting Yan & I, discuss Pascal Barbry’s important #AirwayCellAtlas paper (atsjournals.org/doi/10.1164/rc…) and provide thoughts about the future of lung single cell atlases atsjournals.org/doi/full/10.11…

Our Editorial “Towards a Cell Atlas of the Human Airway” is finally in print - <a href="/jonas_schupp/">Jonas Schupp</a>, <a href="/XitingY/">Xiting Yan</a> &amp; I, discuss <a href="/pbarbry/">Pascal Barbry</a>’s important  #AirwayCellAtlas paper (atsjournals.org/doi/10.1164/rc…) and provide thoughts about the future  of lung single cell atlases atsjournals.org/doi/full/10.11…
Yan Xu (@yanxu_cincy) 's Twitter Profile Photo

“Lung-at-a-glance” offers web functions to search lung anatomic ontology terms and corresponding structure and morphology of lung regions, cells, and marker gene expression patterns in the LGEA database. Now is online Yina Du (pubmed.ncbi.nlm.nih.gov/33385216/)

Yina Du (@yinadu) 's Twitter Profile Photo

"Lung-at-a-glance” offers web functions to search lung anatomic ontology terms and corresponding structure and morphology of lung regions, cells, and marker gene expression patterns in the LGEA database. It is online now!(pubmed.ncbi.nlm.nih.gov/33385216/) ATS Red Journal Lungmap #lungontology

"Lung-at-a-glance” offers web functions to search lung anatomic ontology terms and corresponding structure and morphology of lung regions, cells, and marker gene expression patterns in the LGEA database. It is online now!(pubmed.ncbi.nlm.nih.gov/33385216/) <a href="/AJRCMB/">ATS Red Journal</a> <a href="/lungmapnet/">Lungmap</a> #lungontology
Naftali Kaminski (@kaminskimed) 's Twitter Profile Photo

I guess this result was obvious to F. Perry Wilson, MD MSCE and everybody else that knows the history of #VitaminD interventions. Or did anybody expect a different result? jamanetwork.com/journals/jama/…

I guess this result was obvious to <a href="/fperrywilson/">F. Perry Wilson, MD MSCE</a> and everybody else that knows the history of #VitaminD  interventions. Or did anybody expect a different result?   jamanetwork.com/journals/jama/…
TheLAMFoundation (@lamfoundation) 's Twitter Profile Photo

To acknowledge Dr. McCormack’s commitment to LAM research excellence, we are naming an annual LAM research award in his honor: The Francis X. McCormack Career Development Award. Make a contribution to support LAM research in his honor here: give.thelamfoundation.org/give/326217/#!…

To acknowledge Dr. McCormack’s commitment to LAM research excellence, we are naming an annual LAM research award in his honor: The Francis X. McCormack Career Development Award.  

Make a contribution to support LAM research in his honor here: give.thelamfoundation.org/give/326217/#!…
TheLAMFoundation (@lamfoundation) 's Twitter Profile Photo

The LAM Foundation is pleased to announce the 2021 virtual research conference: Transforming Our Understanding of LAM on 8/20/21 from 11 - 2 PM EDT. This workshop will highlight recent advances in our understanding of the pathobiology of LAM by using single-cell RNA-sequencing.

The LAM Foundation is pleased to announce the 2021 virtual research conference: Transforming Our Understanding of LAM on 8/20/21 from 11 - 2 PM EDT. This workshop will highlight recent advances in our understanding of the pathobiology of LAM by using single-cell RNA-sequencing.
TheLAMFoundation (@lamfoundation) 's Twitter Profile Photo

Register for the 2021 LAM Research Virtual Conference on 8/20/21. This workshop will highlight recent advances in our understanding of the pathobiology of LAM by using single-cell RNA-sequencing. Learn more and register today: thelamfoundation.org/2021-LAM-Resea…

Register for the 2021 LAM Research Virtual Conference on 8/20/21. This workshop will highlight recent advances in our understanding of the pathobiology of LAM by using single-cell RNA-sequencing. Learn more and register today: thelamfoundation.org/2021-LAM-Resea…
Lungmap (@lungmapnet) 's Twitter Profile Photo

LungMAP is happy to share our recent preprint describing a series of interconnected LungMAP web portals to provide supervised single-data analyses, exploration of integrated datasets and new community resources. biorxiv.org/content/10.110…

LungMAP is happy to share our recent preprint  describing a series of interconnected LungMAP web portals to provide supervised single-data analyses, exploration of integrated datasets and new community resources. biorxiv.org/content/10.110…
Maria C. Basil (@mariacbasil) 's Twitter Profile Photo

Great group of amazing Lung Biologists! It was an absolute pleasure to work with this consortium on this awesome resource. Glad I could play a small part in a huge undertaking. And ... check out the AMAZING cover art!

Great group of amazing Lung Biologists! It was an absolute pleasure to work with this consortium on this awesome resource. Glad I could play a small part in a huge undertaking. 

And ... check out the AMAZING cover art!
Lungmap (@lungmapnet) 's Twitter Profile Photo

A census of the lung: CellCards from LungMAP, is now online at Developmental Cell. CellCards provides a functional annotation of cell types within the lung and single cell data for a rigorous catalogue of cell lineages as an evolving online resource. cell.com/developmental-…

A census of the lung: CellCards from LungMAP, is now online at Developmental Cell. CellCards provides a functional annotation of cell types within the lung and single cell data for a rigorous catalogue of cell lineages as an evolving online resource. cell.com/developmental-…
TheLAMFoundation (@lamfoundation) 's Twitter Profile Photo

[1/3] Investigators need four more participants to join the MILED Trial, which examines whether starting low doses of sirolimus early will help individuals with LAM maintain normal lung function.

[1/3] Investigators need four more participants to join the MILED Trial, which examines whether starting low doses of sirolimus early will help individuals with LAM maintain normal lung function.
MorriseyLab (@morriseylab) 's Twitter Profile Photo

A great collaborative effort by all in LungMAP! We hope that others find this useful-it was a blast working with all of these great colleagues to put this together! #WhyWeScience nature.com/articles/s4146…

Yan Xu (@yanxu_cincy) 's Twitter Profile Photo

The LungMAP CellRef paper is online nature.com/articles/s4146… (Nature Communications). This represents the LungMAP consortium efforts. We hope it will be an excellent resource for the lung research community! Lungmap; Cincinnati Children's Biomedical Informatics