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Delighted to work with Shyam Prabhakar Lab, sabine Tejpar, Joanito & many talented colleagues on our paper, using insights from single-cell & bulk -omics to propose an update to CMS classification of colorectal cancer, in Nature Genetics 1/ nature.com/articles/s4158…

Ever wondered how the 'happy pill' Prozac impacts the brain? We did too! Delighted to share our study on the effects of fluoxetine (Prozac) on 27 different rodent brain areas. Paper is out in Molecular Psychiatry & available for free reading. nature.com/articles/s4138… A thread 👇🏾

#PaperAlert Our work on basal lamina maintenance by cathepsin cells & how that affects tissue differentiation is now out on J Cell Science! This work was led by grad students Vinay Kumar Dubey & Souradeep | সৌরদীপ with help from Vairavan Lakshmanan & @RimpleDalmeida journals.biologists.com/jcs/article/do…

Nano3P-seq - method to study polyA tail length ! nature.com/articles/s4159…

For months I collected data about the representation of Dalit, Adivasi and OBC students and researchers at various levels of academia in some of the elite universities in India. The results were stark. That story for nature in 6 charts. 🧵1/n nature.com/immersive/d415…

Hello RNA/DNA twitter! Especially postdocs, PhD students and early career researchers! I am organising the Gordon Research Seminar on Nucleic Acids scheduled to take place on June 17th and 18th 2023 at Maine! grc.org/nucleic-acids-…

nature.com/articles/s4158…

Excited to announce that I recently joined CCMB as a Senior Scientist. Our lab is interested in deciphering the metabolic basis of cell state transitions in microbes using fungal model systems(Baker’s yeast & Pathogenic fungi)#twitterreentry #fungi sriramvarahanlab.weebly.com

Delivery of therapeutic molecules is a major bottleneck for treating a wide range of diseases. Today we describe a new modality for delivering proteins based on an engineered contractile injection system @nature nature.com/articles/s4158…

Congratulations Dr.Baid ! So happy and proud :) Well deserved and your dissertation talk was phenomenal!

RIBOmap for spatially resolved single-cell translatomics is published today! Congrats to the whole team and thanks so much for the constructive feedback and great suggestion from the editor, reviewers, colleagues, and friends! science.org/doi/10.1126/sc…

Want to sequence RNA from cells without killing them or deliver RNA programs from cell to cell? Today in Cell, we present RNA exporters, which package and secrete cellular RNA, for non-destructively monitoring cell dynamics by sequencing and delivering RNA authors.elsevier.com/sd/article/S00…

🔊Start the week right with a fresh episode! 🔊This month Srishti Baid, Ph.D. joins us, sharing her insight & tips on navigating an international career move 🇮🇳✈️🇺🇸We also discuss how some of the challenges of a big move can intersect with being #womeninSTEM ⬇️ Don't miss it! 🧵1/2

1. BANKSY is out! go.nature.com/4bUR200 Our spatial clustering algo applies to any spatial RNA/protein/... assay, scales to 2M cells, detects both cell typing and spatial domains and facilitates spatial batch correction. 🧵 👇

Many of us use GFP all the time in lab, but have you ever wondered what fluorescent proteins do in nature? I’m delighted to share our paper (pnas.org/doi/10.1073/pn…), hot off the presses, where we uncover new roles for FPs in intertidal sea anemones. Curious? Read on: 🧵1/n

Have you ever seen real-time footage of a tumor developing outside a living organism? We are thrilled to announce a new paradigm in ex vivo cancer modelling rdcu.be/dFD2v. Let’s have a quick look!

Interested in 3' UTR changes in scRNA-seq? Check out our: * CPA-Perturb-seq paper * UCSC Perturb-seq tracks (see who regulates your favorite 3’ UTR!) * Seurat extension for polyA site analysis (PASTA) * Deep neural perturbation network (APARENT-Perturb) cell.com/cell/fulltext/…

BREAKING NEWS The 2024 #NobelPrize in Physiology or Medicine has been awarded to Victor Ambros and Gary Ruvkun for the discovery of microRNA and its role in post-transcriptional gene regulation.