High-powered imaging + genomics data + #OpenSource tools = #ImagingTheFuture! Kunal Pandit is building an open access plugin for the napari hub that will make it easier for researchers around the world to make detailed maps on how genes are expressed throughout a tissue

Ivan Raimondi from NY Genome Center on multi factorial chromatin profiling at single-cell resolution #singlecellgenomicsday

Harm Wessels and Carol Dalgarno on new technologies and opportunities for single-cell perturbation screens #singecellgenomicsday

Yuhan Hao on cross-modality integration of single cell data #singlecellgenomicsday

Subhajit Dutta NYGCtech Rahul Satija NY Genome Center All the plasmids will be available in Addgene soon. TFs profiling is still challenging with transposase-based methods, but we figured that out, stay tuned…

My labs NY Genome Center NYGCtech Columbia BME @UU_University hiring at all levels! If you’re interested in #techdev #singlecell #SpatialTranscriptomics Human Cell Atlas get in touch with bio&description of (i) what you want to work on and (ii) fav project so far [email protected]

Check out the tweetorial below on #PySeq2500 from NYGCtech ‘s Kunal Pandit and NY Genome Center ‘s Joana Petrescu! In it they walk you through how they used an Illumina HiSeq2500 for imaging and how you can run your advanced assay on your HiSeq2500 too!

We posted 8 positions in the last week alone NY Genome Center NYGCtech Come join the best #Innovation program in the country to work with @manimota Raimondi Ivan Kunal Pandit Chao Yan nygenome-openhire.silkroad.com/epostings/inde…

The napari-PICASSO plugin for napari to unmix images with fluorescence spillover is out. Come to poster 576 AGBT Meeting to chat about the plugin and teaching an Illumina HiSeq 2500 new tricks.

Abstract Select: Sanja Vickovic from NY Genome Center focuses on spatial host-microbiome sequencing at the 2023 @AGBT General Meeting in Florida. #AGBT23

Spatial-host microbiome sequencing (SHM-seq) shows accurate measures of interactions between intestinal crypts’ gene expression changes and the dynamics of the bacterial residents, by Sanja Vickovic from NY Genome Center #agbt23

Sanja Vickovic on spatial host-microbiome sequencing #AGBT23

A pioneer in spatially resolved transcriptomics and genomics methods, Sanja Vicković recounts her journey from professional ice hockey player to running her own lab go.nature.com/3OmrPlK rdcu.be/dg9s4

IICD member Sanja Vicković was recently awarded a two-year grant from Target ALS for her project "creating a spatial genomics resource for ALS-FTD neuropathies." Read more: bit.ly/44dDisj cc: Columbia BME NYGCtech NY Genome Center

🔬 Excited about s.'s insights in Cell Systems on the potential of spatial molecular profiling! 🧪🔍 #CellSystems #MolecularProfiling 📚 Check it out: cell.com/cell-systems/f…

Another researcher joins the IICD: Craig Fouts, an MS in APAM & MSE @ Columbia Engineering, develops statistical #machinelearning tools and designs probabilistic models for #singlecell genomics in s. and bianca dumitrascu labs NYGCtech.

🔬Insights from s. on her journey through interdisciplinary collaboration! Discover how her work at the intersection of genomics and biomedical engineering with @NYGenome & @cancer_dynamics sparked innovation and new perspectives.🌟 #ScienceCollab #InnovationJourney

Welcome Roy! Roy is a Columbia BME student in s. lab NYGCtech, working on optimizing multi-omics technologies and leveraging such tools to identify therapeutic targets for disease networks. #ColumbiaBME #NYGCtech #multiomics #therapeutictargets Roy!

👋 Welcome to the NYGCtech lab Ruiyang He! Ruiyang is a PhD student from Columbia BME who will blend #computationalmethods with #spatialtranscriptomics tech to delve into spatial organization's role in development & disease. 🧬🔬 #Science #Research

Super happy to see our work on spatial host-microbial interactions out and about! Congrats to Britta and Martin Stražar who spearheaded the work! This was one for the ages! Big thanks to NYGCtech Columbia - Irving Institute for Cancer Dynamics Columbia BME KAW Broad Institute @UU_University NHGRI