Do you have multiome single cell data and is looking for a method to detect a common latent space? MOJITOO uses canonical correlation analysis for fast and parameter free estimation of a latent space tinyurl.com/4w63bpen tinyurl.com/27tveybc Mingbo Zhijian Li (1/3)

"MOJITOO: a fast and universal method for integration of multimodal single-cell data" is published in ISMB proceedings (tinyurl.com/47vpmdc2) with extended benchmarking and an comprehensive website costalab.github.io/MOJITOO/. Check the talk by Mingbo at ISCB RegSys!

Dissecting the molecular function of a particular gene is complex and laborious work 🧬🧫🔬 Find out iScience journal 👀 doi.org/10.1016/j.isci… how you can use the variation in multi-layered datasets from human cohorts to infer phenotypic relevance for your gene of interest. [1/5]

📢Join SCOG Virtual Lecture #50 (Zoom) ⏰ December 16, 9:30-10:15am CET 💬Fabian Theis (Fabian Theis, Helmholtz Munich | @HelmholtzMunich, Computational Health Center) 💡 "*ingle *ells, *ingle *ells: my letter to Santa on what single cell can bring next year" ✏️ Registration: bit.ly/scogvls #SCOGVLS

Thrilled to share PHLOWER, which uses Hodge Laplacians to build trajectory-level embedding for inferring complex cellular differentiation trees from multimodal (RNA+ATAC) single-cell data by Mingbo Jitske Jansen with Rafael Kramann, MD PhD Christoph Kuppe tinyurl.com/yvu48j6k 1/7

With Bella Banjanin and Yevin Mun, it’s my pleasure to present our last hunting story. Using our joint expertise from the Costa Lab - @costalab.bsky.social , Rebekka Schneider , and Nombela-Arrieta Lab, we tried to find another missing piece of the complex bone marrow fibrosis puzzle.