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We are live! 🚀 Hall Lab kicking off with keynote talk on the gut microbiome s a key regulator of health and disease in preterm infants. #cphgut 🌟

I have an open position for a DTU Tenure Track Assistant Professor in Explainable AI Bioinformatics at the Bioinformatics Section at DTU Health Tech efzu.fa.em2.oraclecloud.com/hcmUI/Candidat…

So exited to share our newest paper in Nature Medicine, where we link early life gut virome with later asthma. Specific compositions of temperate phages drive the association independently from their bacterial counterpart and interacts with host genetics. nature.com/articles/s4159…

The baby #phage #asthma story is on the front page of politiken.dk now

We wrote a grant in 2015, got funded in 2016 (JPIHDHL/Europe, DAHES/Denmark, INRAE/France, #CIHR/Canada), then a team of great scientists elevated this initiative to a new high. Extra funding led to this👇Huge congrats to the EarlyVir Team! #phage #COPSAC nature.com/articles/s4159…

Thanks to guests Nicholas Timpson of Children of the 90s (UK) 🇬🇧, Melissa Wake of GenV (Australia) 🇦🇺, Jakob Stokholm & Klaus Bønnelykke of COPSAC (Denmark) 🇩🇰 for sharing their incredible experiences with #birthcohorts at the CHILD SickKids Foundation symposium! childstudy.ca/symposium-spot…

📢 Last call to sign up for the R course! ⚠️ Only 3 places left! ⚠️

Save the date and register for the upcoming webinar: "Maternal inflammation during pregnancy and risk of immune-mediated diseases in birth cohorts" Tuesday, April 9, at 13:00 BST / 14:00 CEST selectscience.net/register.aspx?… Jonathan Thorsen HEDIMED COPSAC EU Science & Innovation 🇪🇺

I am looking for a #postdoc. Come join if you are curious about #type2 #immune regulation in #lung versus #brain. efzu.fa.em2.oraclecloud.com/hcmUI/Candidat…

We are hiring! Please consider this unique postion in planning your career TU Graz

Help me find the right person! We are looking for a PhD student COPSAC to explore the airway microbiome in childhood asthma. Great project, fantastic place to work & learn. Please share with anyone who might be interested. Questions? DM me! Thanks! copsac.com/home/about/job…

📢📢We are hiring📢📢 Looking for a senior post-doc/research associate with expertise in #immunology to lead our team in unravelling new human inborn errors of immunity. Our lab is in beautiful Vancouver 🇨🇦. Full details here: ubc.wd10.myworkdayjobs.com/ubcstaffjobs/j… UBC Dept of Microbiology and Immunology University of British Columbia

UGENS FORSKER: ”Jeg vil gerne forstå den rolle, som bakterier spiller for børneastma – særligt hos de små børn"🦠🩺 Sådan siger Jonathan Thorsen fra HerlevGentofte Hosp., der undersøger børneastma i målet om bedre forebyggelse og behandling af sygdommen. dff.dk/ansog/stottet-…

Trine Zachariasen made this masterpiece during her PhD. Go check it out! MAGinator provides de novo identification of subspecies-level microbes and accurate abundance estimates of MAGs. Code and cluster setup using Conda and Snakemake on Github nature.com/articles/s4146…

.Section of Microbiology UCPH Jonathan Thorsen Jakob Stokholm COPSAC present MAGinator, a tool that enables accurate profiling of microbiomes with strain-level information. #BiotechNatureComms Nature Communications nature.com/articles/s4146…

Lovely to come back from holiday and see this published, led by the great Trine Zachariasen. MAGinator is a wonderful resource helping unify taxonomy and functions in the analysis of metagenomes. Oh and the stuff Gisle said 👇 Now a COPSAC default! Thanks all contributors!

Our online mixOmics workshop starts on Oct 21. It is self-paced with 4 live webinars, and we provide advice to analyse your own data. You will learn about data exploration and omics data integration techniques! See 👇 mixomics.org/2024/06/online… MIG🦋@mig-unimelb.bsky.social #omics #Rstats

For somebody working on the gut #microbiome, the responses ("gross", "embarrassment", "pseudoscience", etc.) to this nature article on the treatment of C-section babies with their mother’s poo are quite sobering. So, I thought I would provide a perspective in the thread below.