halo #javadevelopers!! 🗣️Did you see the last masterpiece 🌟 of Carlos García and colleagues Icy deepImageJ for 𝗗𝗟 𝗲𝗻𝗮𝗯𝗹𝗲𝗱 #𝗯𝗶𝗼𝗶𝗺𝗮𝗴𝗲𝗮𝗻𝗮𝗹𝘆𝘀𝗶𝘀 😎? 👇 Looking forward to new tools and pipelines exploiting it 😍 #JDLL arxiv.org/abs/2306.04796

📢 Exciting news! We are thrilled to announce the launch of deepImageJ 3.0! 🎉 Our latest release brings, thanks to the connection with #JDLL, new features and improvements to enhance your image analysis workflows in Fiji deepimagej.github.io

🔜Next Cell Biology & Infection seminar this Tuesday Aydogan Ozcan biophotonics@UCLA from UCLA Samueli Engineering Deep Learning-enabled Computational Microscopy and Diffractive Imaging Invited by BIA Unit

The #ISBI2024 Call for Papers is now open! All submissions must be original and not under concurrent review at any other conference or journal. Submit your papers by November 10. Learn more here: hubs.la/Q022jclr0

Hanson A, Reme R, Telerman N, Yamamoto W, Olivo-Marin JC, Lagache T, & Yuste R. Automatic monitoring of whole-body neural activity in behaving Hydra. bioRxiv, 2023-09. An open-source platform to monitor neurons’activity in behaving Hydra. #Hydra #Byotrack #TraseIn #Python #Icy

Tracking Intermittent Particles with Self-Learned Visual Features. R Reme, V Piriou, A Hanson ... 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), 1-5 Using visual features for single-particle tracking in fluorescence imaging. #Hydra #Byotrack #Python #icy

📣 The Call for application to the Pasteur-Paris University International Doctoral Program is now open Deadline 📆 31/10/23 Apply now 👉 ppu.pasteur.fr/ppu_etud_accue… #PhDProgram #EmergingInfectiousDiseases #AntiMicrobialResistance

Last days to apply! (deadline is Wednesday)

Icy (Taken from the BioEngine website.)

Coming soon to Icy ... Run #stardist on your images without code using the Bioimage.io models.💥💥 Thanks to #JDLL and #appose, we're bringing the power of Deep Learning and Python to the easy-to-use Java world. Much more is coming!

github.com/bioimage-io/JD…

Michael Delves Icy All the chances! In addition, the plugin (called DeepIcy) will be intended to be as easy as opening an image and clicking on run.

Thrilled to announce our latest paper, 'JDLL' is now published in @NatureMethods! A perfect start to the New Year 🥳 and a fantastic gift from the Reyes Magos! 🌟 Check it out here: rdcu.be/dvqwn Happy Reading & Happy New Year to all! 📚🎆 Icy deepImageJ

Out last week from the Tinevez and Olivo-Marin labs! JDLL: a library to run deep learning models on Java bioimage informatics platforms. This is sure to streamline deployment of DL models in bioimaging. nature.com/articles/s4159…

Super proud of this work and it was done with awesome colleagues. Let's now put this tool to good use!

Can't be happier about the new #JDLL from Carlos García Jean-Yves Tinevez and JC Olivo-Marín being published already!🥳 Congratulations to all!🍾 Looking forward to seeing the consumer box crowded 🤖and the new requests to keep this library growing 🚀 rdcu.be/dvqwn

Now available on Scientific Reports nature.com/articles/s4159…

Less than 24h for an exciting exercise that says "Load, use and fine-tune models from BioImage.IO using #DL4MicEverywhere... and export them back to the #BioImageModelZoo format to reuse them in ilastik Team and Anna Kreshuk's Lab deepImageJ Icy let's see how optimistic this can be 😎

💡 BioFlow is an image-based method able to extract velocities, pressure and forces inside living cells observed in fluorescence microscopy 🔬🖥️ icy.bioimageanalysis.org/plugin/bioflow/ 👉 The lateral movement of fan-shaped amoeboid cells is not pressure-driven ‼️