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Cannot agree more! Garry P. Nolan

Have you ever wondered if meaningful signals have been removed after batch correction? If so, please see below for a recent study with Jane Zhang, Nancy Zhang and other collaborators on how to retain meaningful signals and correct batch effects at the same time.

Nobel Prize winner Katalin Karikó was 'demoted 4 times' at her old job. How she persisted: 'You have to focus on what's next' cnb.cx/3tqKkxm

AI is all in the news, but scientists have been deploying its cousins machine learning and neural nets for nearly a decade in cancer research. One of the limitations in getting as many "eyes on the target" in studying cancer is that each KIND of target needs a different sensor

Congrats to Bokai Zhu and the wonderful team! Ever feeling frustrated with annotating cells from a spatial-omics dataset with a small targeted panel? CellSNAP helps by leveraging info from cell location and tissue image via a parallel GNN architecture. biorxiv.org/content/10.110…

It has been my great privilege to have had Sagnik Nandy as a student. May your career a wonderful journey! I am proud of you.

Congratulations to Rong Fan, Mina L. Xu, MD, Stephanie Halene, MD, Dr Med, HaleneLab and Zongming Ma, who received an NIH #U01 award to create the Center for Human #Lymphoma Spatiotemporal Atlas (HuLymSTA). yalecancercenter.org/news-article/y… Smilow Cancer Hospital Yale School of Medicine Yale New Haven Hosp Yale Pathology

Excited to share our first preprint on a novel spatial multi-omics technology that co-profiles five modalities within the same tissue section. Great collab w/ Marek Bartosovic and Mingyao Li . Kudos to my postdoc Pengfei Guo and PhD student Liran Mao ! biorxiv.org/content/10.110…

Extremely excited to join the @NCIHTAN consortium!!! Here is how we started our first Yale HTAN HuLymSTA center meeting 🥰 with Mina L Xu Halene Lab Zongming Ma Yale Cancer Center Yale Engineering Yale School of Medicine

Very happy to see the paper out today on NBT. See the thread by Nancy Zhang for some perspectives about batch integration that have motivated this work.

Super happy to see this! Many thanks to Garry P. Nolan, Sizun Jiang, Bokai Zhu, and Shuxiao Chen for introducing me to this exciting field!! 😍

Incredible experience to give a closing talk at the Beatson Cancer Conference in an IMAX theater🤩. Largest screen ever to give a presentation 🥳. Thanks to CRUK Scotland Inst for inviting me to share our National Cancer Institute #HTAN team work w/ Mina L Xu Zongming Ma also funded by Follicular Lymphoma Foundation The Mark Foundation for Cancer Research!