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Another milestone for APHL and The Global Fund! This week’s training at the Ethiopian Public Health Institute 🇪🇹 focused on #wastewater surveillance using NGS, mNGS, bioinformatics, & genomic epidemiology. 🧬 The team successfully completed a full analysis independently on Terra discovering

Excited to host Kate Baker Tuesday April 30 9-10am PST Microbial genomics for understanding the epidemiology and management of shigellosis calendar.ucsf.edu/event/eppicent…

We're at #APHL 2024! Be sure to stop by to visit with us and grab a duck 😊

Congrats, Kelly Oakeson!! You’ve been pushing things forward ever since stepping foot in public health. Thank you for everything you’ve done for both the field and me personally. Fantastic colleague and friend

While Ollie doesn't seem particularly concerned, I find the continued detection of HPAI (H5N1) in cats without known epi links to dairy cattle fairly alarming. Thanks to those that are rapidly testing, sequencing, and sharing data for the ongoing outbreak!

Congratulations to Rahil Ryder and Emily Smith and all co-authors - great work reviewing sequence data for SARS-CoV-2 recombinants in California!! Viruses MDPI mdpi.com/1999-4915/16/8…

Just added 10 recorded workshop sessions from the The National Academies of Sciences, Engineering, and Medicine's recent two day workshop on pathogen genomics in public health to the recorded trainings table. Please share and send me other genomic epi trainings I should add!

The windy roads are way more fun. And no career track is straight line, anyway. Seeing opportunities in academia, private industry, and public service,Sharvari Narendra tried it all. Through this journey, she's crafted a creative scientific path that inspires her daily.

We are immensely proud to work closely with the Pathoplexus team to help establish better standards for public health and bioinformatics.🧬🌍

One of the reasons I've been quiet on Twitter for a few months is because I've been working on something big - something I'm really happy to share now! Pathoplexus.org A new, open-source database for pathogen sequence sharing. 👐🧬🌎 1/12

🚨 New Courses Alert! 🚨 Explore our latest APHL Learning Platform self-paced courses on Viral Amplicon Genomic Characterization & Genomic Epidemiology! 📚🌍 Designed for a global public health audience, these trainings include lecture videos, slides, exercises & mock datasets.

The 14th Global Microbial Identifier conference #GMI14 🇪🇸 has just kicked-off with the welcome of Eric Stevens U.S. FDA . It's all about genomic sequences, one health, planetary health 🌐 and we are happy to represent plant health 👨‍⚕️ #genomics #data #health #security #openscience

Great opportunity to join a leading laboratory in our field

Torsten Seemann giving a classic Torsten talk = lots of giggles, nods and agreements on the diverse discipline that is #bioinformatics at #GMI14 🇪🇸🧬 #CPG UniMelb MDHS Doherty Institute

💡🧬🦠🧪Kudos to Theiagen Genomics Genomics (Emily Smith); they have created a JSON file for the inputs needed to use the TheiaCov pipeline in Terra to analyze amplicon tiling NGS for Mpox Clade 1b. x.com/NoahHull_PhD/s… Through the APHL Terra Async training

So great to see such a massive turnout for #ASMNGS! ASM Let’s go! 🚀🧬🦠🧫 #genomics #bioinformatics #publichealth

!!SAVE THE DATE!! Applied Bioinformatics & Public Health Microbiology Conference 🧬  🗓️ Dates: 21 - 23 May 2025 Explore how cutting-edge #Genomics, #Bioinformatics, and sequencing technologies are transforming global #PublicHealth🌍 📎More information: bit.ly/3XW3XIX

So grateful to have presented our findings from a large review project assessing metadata usage in genomic epidemiology at ASM NGS in Washington, DC. We hope this work improves repository submissions by pushing for machine-readable data! (And also improve NCBI mandatory fields)

Alex Sundermann is a scientist I’ve enjoyed learning from. In particular, I’m fascinated by his perspective as a boots-on-the-ground infection preventionist who now works to integrate NGS and bioinformatics in healthcare. His work highlights the undeniable impacts of these