
Sarah Nyquist
@snyquist2
Postdoc at Gladstone Institute with @BeEngelhardt, previously @MITCSBPhD student in @shaleklab + @lab_berger, she/her
ID: 491011432
https://snyquist2.github.io/ 13-02-2012 04:48:51
19 Tweet
173 Followers
393 Following



Thank you Forbes Under 30! Excited to finally get responses to my cold emails now.

Ever wondered what are the cells in human milk doing? Check out our latest work to find out!! go.nature.com/3IK8VPX Walid Khaled Dept. of Pharmacology, Univ. Cambridge Cambridge Stem Cell Institute Helmholtz Munich | @HelmholtzMunich School of Biological Sciences ISRHML

How can we collect good enough data for machine learning driven protein design? We show that random numbers are part of the picture. Work with the David Baker lab (including Erika Alden DeBenedictis ) and MSRNE (with Kevin K. Yang 楊凱筌 and Lorin Crawford ). (1/4) biorxiv.org/content/10.110…




Can ML build diverse protein scaffolds around functional motifs? We find equivariant diffusion models and Sequential Monte Carlo may help! Joint work with Jason Yim, and coauthors Doug Tischer, Tamara Broderick, David Baker, Regina Barzilay and Tommi Jaakkola arxiv.org/abs/2206.04119

So excited to share our paper "Genome-wide mapping of somatic mutation rates uncovers drivers of cancer" is out on Nature Biotechnology (and open access)! nature.com/articles/s4158…. Here's a🧵on what we did and what we found!


Can you accurately scan ~10 million drug-target pairs per minute? We think you can! In our new preprint (with Rohit Singh , Lenore Cowen, and Bonnie Berger Lab ), we develop ConPLex, a high-throughput method for predicting drug-target interaction (DTI). biorxiv.org/content/10.110… 🧵

I am excited to share the preprint of my first postdoc paper (with Ran Blekhman Frank Albert @DemerathE), “Human milk variation is shaped by maternal genetics and impacts the infant gut microbiome” !!! biorxiv.org/content/10.110… This project began…





I vote for Rice University’s "GenomeAssemblyInAWeek" #Innov8POWER8 project. Cast your vote: ibm.co/1zc4v8z

