🔥The 9th Round of Easy Loan, Earn $40 Reward is in progress❗️ ⏰ Promotion Period: January 15th - Feburary 15th, 2025 👉 Register now and check more details at gate.io/campaigns/358

sciRED enhances the interpretation of scRNA-seq factorisation by linking factors to known covariates and hidden biological phenomena. Delaram Pouyabahar Gary Bader #BiotechNatureComms nature.com/articles/s4146…

📑📑📑#synthetic_biology @enricooorsi Helena Schulz-Mirbach Pablo Iván Nikel @pabnik.bsky.social SYBORG present a workflow for designing versatile auxotrophic metabolic sensors for glyoxylate and glycolate detection #BiotechNatureComms nature.com/articles/s4146…

.Mingze Dong Rong Fan @Klugerlab develop a theoretically grounded deep learning framework SIMVI for dissecting cellular intrinsic properties and spatial interactions #BiotechNatureComms Nature Communications nature.com/articles/s4146…

.Alex Khang Anseth Group develop mathematical descriptors of cell morphology and structures to consistently grade #fibroblasts. #machinelearning #BiotechNatureComms Nature Communications nature.com/articles/s4146…

CodonTransformer generates species-specific DNA sequences with natural-like profiles and with minimum negative regulatory elements. Adib University of Toronto Amir Pandi @inserm #BiotechNatureComms nature.com/articles/s4146…

Tensor-FLAMINGO reconstructs high-resolution single-cell specific 3D genome structures, leading to insights into chromatin folding, gene regulation and disease SNPs. Jianrong Wang #BiotechNatureComms nature.com/articles/s4146…

.Pranam Chatterjee Lauren Hong use protein language models to design target-binding peptides, which are attached to the catalytic domain of the OTUB1 deubiquitinase, generating duAbs. #BiotechNatureComms nature.com/articles/s4146…

MSFragger-DDA+ is a database search tool that enhances peptide identification by searching the full isolation window. #Proteomics Fengchao Yu Alexey Nesvizhskii #BiotechNatureComms nature.com/articles/s4146…

The BGI team presents a flexible framework Stereopy that infers comparative and spatiotemporal cell-gene patterns #BiotechNatureComms Nature Communications nature.com/articles/s4146…

.Jérémie Kalfon @julessamaran Laura Cantini Gabriel Peyré present a foundation model trained on 50 million cells, generating a meaningful gene network with zero-shot ability. #BiotechNatureComms Nature Communications nature.com/articles/s4146…

EvoWeaver identifies genes working together using evolutionary information and infers protein functions using only genomic sequences. Erik Wright #BiotechNatureComms Nature Communications nature.com/articles/s4146…

scMultiMap is a statistical method for mapping enhancer-target gene pairs with single-cell multimodal data. Chang Su Emma Jingfei Zhang Emory Public Health #BiotechNatureComms nature.com/articles/s4146…

HERGAST identifies fine-scale spatial structures and amplifies gene expression signals in ultra-large-scale Spatial Transcriptomics data. YuqiaoGong #BiotechNatureComms nature.com/articles/s4146…

Kasumi identifies local patterns in tissue patches in spatial omics data Jovan Tanevski Saez-Rodriguez Group #BiotechNatureComms nature.com/articles/s4146…

.Huimin Zhao develop a Variational Autoencoder to design novel mitochondrial targeting sequences across eukaryotic organisms CABBI Genomic Biology @ChBE_Illinois #BiotechNatureComms nature.com/articles/s4146…

A data-efficient, generative AI-based toolkit for designing a diverse set of RNA molecules. Nature Communications #BiotechNatureComms nature.com/articles/s4146… alexgreenlab.org

scMINER enhances clustering and reveals regulatory networks and hidden biological drivers Jiyang Yu The Yu Lab St. Jude Research #BiotechNatureComms   doi.org/10.1038/s41467…

MEMPLEX is a machine learning–guided platform for high-throughput #synthesis of membrane proteins in artificial #cellfree systems. Nature Communications doi.org/10.1038/s41467…

CellFM: A 800-million-parameter #foundation_model pre-trained on transcriptomics of 100 million human cells. #BiotechNatureComms Nature Communications nature.com/articles/s4146…