It's time to run #minimap, #samtools, #nanopolish, #f5c, #artic, etc. on your phone now - not on the command line, but on a GUI. Check out our Android App "genopo" at nature.com/articles/s4200… Portable analysis for the portable Oxford Nanopore MinION or anticipated SmidgION.

Data frames to files in seconds! Today's tip about writing large numbers of data frames to files in R, with proper vectorisation. #tipoftheday ryim.github.io/r/tipoftheday/…

Snakemake on AWS the easy way! Automated installation of Snakemake and Tibanna on Amazon Web Service images using the Image Builder. ryim.github.io/tibanna/snakem… #Snakemake #AWS

Top HiFi, middle Duplex Kit14, bottom ILMN.

Just found out about bioicons.com It's full of useful cartoons for presentations, like this plate of cells!

Bees!

Quick installation of the latest HTSlib! Install the latest version of the library automatically, and without any user intervention. ryim.github.io/bash/quicktip/… #samtools #bioinformatics

Looking forward to the #ISCB43 conference on #biostatistics at Newcastle University! ISCB_info Newcastle University

Subsampling datasets in seconds Converting a multivariate dataset into training and test datasets can be done with just a few lines. ryim.github.io/r/basics/stati… #MachineLearning #Bioinformatics #Genomics #DataScience

How to use external email clients with Newcastle University email! NUIT recommend using Outlook or the website for access, but you can still use external clients using this guide: ryim.github.io/newcastleunive… #newcastleuniversity Newcastle University

Clustering in R with a custom distance function ryim.github.io/r/phylogenetic… #Bioinformatics #DataScience #Genetics #genomics

Had a great time at the CLR-UK meeting at the The Francis Crick Institute yesterday. Fascinating talks, and great plans for the future of #Leukemia research.

If you've used one #HPC cluster and need to use a new one, this translates between PBS, qsub, Slurm, LSF and LoadLeveler #Bioinformatics slurm.schedmd.com/rosetta.pdf

Found this tiny guy on a hike this weekend 🍄

How to use wrapper scripts to run lots of jobs on an HPC cluster ryim.github.io/bioinformatics…

A new user's introduction to using Newcastle University's Rocket cluster: ryim.github.io/bioinformatics…

Loading multiple files into a single df and preprocessing them ryim.github.io/r/basics/2023/…

Fascinating to hear more about the role of our discovery science in personalised cancer medicines at yesterday's Cancer Research UK Behind the Science event. Thanks to panellists David Crosby, KJ Patel CAM-OX traveller, Jean Abraham, @MariamJHanjani, Ryan Lab for an insightful discussion.

We all had a wonderful time at the Cancer Research UK #BehindTheScience event! Thank you to the team for organising such an enlightening and enjoyable evening.

An explanation of variables and how they work with functions in R ryim.github.io/r/basics/2023/… #Bioinformatics