resgen_io (@resgen_io) 's Twitter Profile
resgen_io

@resgen_io

A repository of genome-indexed information and next-gen genome browser located at resgen.io. Built w/@higlass_io.

ID: 1215764086312464384

calendar_today10-01-2020 22:35:34

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resgen_io (@resgen_io) 's Twitter Profile Photo

Still working on serverless migration. Slow going but finally making some progress on using oxbow for BAM file loading. Got 1.5 PRs out to add support for loading tags and reference sequences: github.com/abdenlab/oxbow… github.com/abdenlab/oxbow…

resgen_io (@resgen_io) 's Twitter Profile Photo

Finally switched resgen.io backend to serverless. This enables much greater scalability. Please excuse and report any hiccups you may encounter in the next few days.

resgen_io (@resgen_io) 's Twitter Profile Photo

We've been serverless for a couple months now. It's been growing pains but performance and scalability is improving. There's a new caching layer that should improve responsiveness for the most frequently used tilesets.

resgen_io (@resgen_io) 's Twitter Profile Photo

Hot tip: If you're having resgen / higlass performance issues on Chrome on Mac OS X, try entering "about://flags" in the url bar and setting "Choose ANGLE graphics backend" to "OpenGL".

resgen_io (@resgen_io) 's Twitter Profile Photo

Got a version of paired-end read pileups out. The aesthetics are nice but the layout algorithm needs some work. Still not quite ready for prime time. Nevertheless, here's a link to try it out with Gorilla data from Yoo et al. 2024 (EichlerLab). resgen.io/paper-data/Yoo…