The RNA Atlas, a single nucleotide resolution map of the human transcriptome Interactive exploration of any #RNA transcript from multiple library enrichment strategies (polyA, ribo depletion, small RNA). Also includes the #longhorn viewer for #LncRNA r2platform.com/rna_atlas

Explore an integrated single cell neuroblastoma resource ( 68 patients ) in R2. NBAtlas: A harmonized single-cell transcriptomic reference atlas of human neuroblastoma tumors r2platform.com/nbsca

There is a lot of debate over #violin being better than #boxplot. Within the r2.amc.nl #data #science platform for researchers, we like the #raincloud plot, since it combines the best of 3 #plot types: violin, box & jitter. Also #visually #appealing #dataviz

Explore 2,700+ public resources in the open online R2 genomics analysis and visualization platform ( r2.amc.nl ). Everything can instantly be explored 2900+ citations in NCBI PubMed

How to Create / Use DepMap gene expression signatures in the R2 platform youtu.be/YT8xosU2wOk?si… via YouTube

Browse the human genome with alpha missense (deep learning) from #google Deepmind in the embedded genomeBrowser of the R2platform ( r2.amc.nl ). #DataAnalytics

New datascope in R2: One of the most comprehensive studies on the impact of preanalytical variables on cell free RNA profilles. Assessment of RNA purification methods and blood collection tubes in 456 extracellular transcriptomes. Nature Communications #exRNAQC r2platform.com/exRNAQC/

#MultiOmics representations of 1000+ colorectal cancer (CRC) samples (WGS, RNAseq) Explore them in the open online R2 genomics analysis and visualisation plaform for biomedical researchers (r2.amc.nl). Dozens of implemented data science tools 2900+ pubmed citations

Find differential gene expression in #TCGA prostate cancer or dozens of other prostate cancer resources in the R2 open online data science platform (r2.amc.nl) e.g. Gleason score

Want to do data science, but not ready to dive into coding? Have a look at the open online R2 genomics Analysis and Visualization Platform (r2.amc.nl). R2 is designed to be operated by biomedical researchers and requires no coding or bioinformatics expertise.

Visualize public genomics data with ease in the open online R2 platform (r2.amc.nl). the interactive highly customizable graphics makes hypothesis testing a breeze. 2700+ public data sets instantly explorable 2900+ pubmed citations to date #dataviz

with more than 350 publicly available neuroblastoma data sets, the R2 platform (r2.amc.nl) remains the worlds biggest resource for neuroblastoma data mining. And, it's also easy to use as a biomedical researcher. Instantly explorable #usabledata

Another view on DepMap from a data driven angle. Just one of the ways by which you can explore any resource in the open online R2 genomics analysis and visualization platform (r2.amc.nl). #dataviz #Analytics

A short youtube demo on single cell rnaseq data in the open online R2 genomics analysis and visualization platform youtu.be/DANq3zaFVk4 nocode point and click data science for biomedical researchers

New datascope in R2: r2platform.com/TPCPA "The pan-cancer proteome atlas, a mass spectrometry-based landscape for discovering tumor biology, biomarkers, and therapeutic targets" by Jaco Knol in Cancer Cell #dataviz, #proteomics, #datascience, #cancer

The power of cell phase synchronized chipseq. Beckman et al describe cell-phase specific binding patterns of ASCL1 that are not observed in unsynchronized samples. Explore the data also in the open online R2 data #Science platform for biologists r2.amc.nl

Explore data-driven embeddings, e.g. UMAP, tSNE on more than 2500 public resources in the 'sample maps' tool of R2. This is just one of the many avenues R2 has to offer for scientists. R2: open online data science platform for biomedical researchers (r2.amc.nl)

If you are looking for some R2platform pictures to add to your presentation of usage in (social media) posts, then have a look at this collection of images that you are welcome to use r2platform.com/media/

See the evolution of #gencode transcript isoforms in the Gencode Time Machine track within the embedded genome browser of the R2 open online data #science platform for biomedical scientists (r2.amc.nl). R2 also allows you to display many more annotation sources.

Explore the expression of NUCKS1 in TCGA & GTeX in the open online R2 data #science platform for biomedical researchers. 2700+ public resources can be queried instantly. R2 also has data driven embeddings of many data sets (incl. parameter sweeps for umap) r2.amc.nl