Yaron Orenstein (@orensteinyaron) 's Twitter Profile
Yaron Orenstein

@orensteinyaron

Associate Professor of Computer Science and Life Sciences, Bar-Ilan University

ID: 1077098814383812608

linkhttp://yorenstein.wixsite.com/orensteinlab calendar_today24-12-2018 07:09:03

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Yaron Orenstein (@orensteinyaron) 's Twitter Profile Photo

Excited to share FiSSC, a new method to find a smallest sequence cover of sets of degenerate reads. We prove that the problem is NP-hard, and suggest filtering steps and an ILP solution. We apply it to RNA A-to-I editing data to gauge biological complexity dl.acm.org/doi/10.1145/36โ€ฆ

Yaron Orenstein (@orensteinyaron) 's Twitter Profile Photo

It was a pleasure to host Regev Schweiger today at the Department of Computer Science at Bar-Ilan University and hear about his methods to infer coalescent times and analyze sperm genomes for cross-over and gene-conversion detection (((ู„()(ู„() 'yoav))))๐Ÿ‘พ

It was a pleasure to host <a href="/RegevSchweiger/">Regev Schweiger</a>
today at the Department of Computer Science at
<a href="/ubarilan/">Bar-Ilan University</a> and hear about his methods to infer coalescent times and analyze sperm genomes for cross-over and gene-conversion detection <a href="/yoavgo/">(((ู„()(ู„() 'yoav))))๐Ÿ‘พ</a>
RECOMBseq (@recombseq) 's Twitter Profile Photo

๐Ÿšจ Deadline Extended: Call for Papers - RECOMB-seq 2025 ๐Ÿšจ Great news! You now have an extra week to submit your work. ๐ŸŽ‰ Updated Deadlines: ๐Ÿ”น Abstract Registration: Jan 31, 2025 ๐Ÿ”น Submission: Feb 7, 2025 recomb-seq.github.io/papers/

Yaron Orenstein (@orensteinyaron) 's Twitter Profile Photo

It was a pleasure to host Nadav Rappoport at the Computational Biology seminar at the Faculty of Life Sciences at Bar-Ilan University and hear about his work on fine-tuning and benchmarking clinical LLMs Binyamin Knisbacher

It was a pleasure to host <a href="/nadavrap/">Nadav Rappoport</a> at the Computational Biology seminar at the Faculty of Life Sciences at <a href="/ubarilan/">Bar-Ilan University</a> and hear about his work on fine-tuning and benchmarking clinical LLMs <a href="/BKnisbacher/">Binyamin Knisbacher</a>
RECOMBseq (@recombseq) 's Twitter Profile Photo

๐Ÿšจ Keynotes at RECOMB-seq 2025! ๐Ÿšจ ๐ŸŒŸ Alicia Oshlack โ€“ computational transcriptomics Alicia Oshlack ๐ŸŒŸ Rayan Chikhi โ€“ sequencing data structures Rayan Chikhi ๐Ÿ—“๏ธ Dates: April 24โ€“25, 2025 ๐Ÿ“ Seoul, South Korea recomb-seq.github.io/speakers/

๐Ÿšจ Keynotes at RECOMB-seq 2025! ๐Ÿšจ

๐ŸŒŸ Alicia Oshlack โ€“ computational transcriptomics <a href="/AliciaOshlack/">Alicia Oshlack</a> 

๐ŸŒŸ Rayan Chikhi โ€“ sequencing data structures <a href="/RayanChikhi/">Rayan Chikhi</a> 

๐Ÿ—“๏ธ Dates: April 24โ€“25, 2025
๐Ÿ“ Seoul, South Korea

recomb-seq.github.io/speakers/
Yaron Orenstein (@orensteinyaron) 's Twitter Profile Photo

I had the pleasure of lecturing to high school students and excite them about my bioinformatics research as part of the Israeli Life Sciences Olympiad whose finals took place this morning at Faculty of Life Sciences, Bar-Ilan University Bar-Ilan University

Yaron Orenstein (@orensteinyaron) 's Twitter Profile Photo

ื™ื•ื ืคืชื•ื— ืœืชืืจื™ื ืžืชืงื“ืžื™ื ืขื ืชื–ื” ื‘ืื•ื ื™ื‘ืจืกื™ื˜ืช ื‘ืจ-ืื™ืœืŸ ๐Ÿ“ทื™ื•ื ืจื‘ื™ืขื™ 2.4 | ืฉืขื•ืช: 15:00-18:00 | ื‘ื ื™ื™ืŸ ื ื ื•ื˜ื›ื ื•ืœื•ื’ื™ื” ๐Ÿ“ท ืžืคื’ืฉื™ื ืื—ื“ ืขืœ ืื—ื“ ืขื ื—ื•ืงืจื•ืช ื•ื—ื•ืงืจื™ื ืžื•ื‘ื™ืœื™ื ื‘ืชื—ื•ืžื™ ื”-STEM ๐Ÿ“ท ืกื™ื•ืจื™ื ื‘ืžืขื‘ื“ื•ืช ืžื—ืงืจ ื—ื“ืฉื ื™ื•ืช ๐Ÿ“ท ื›ืœ ื”ืžื™ื“ืข ืขืœ ืžืœื’ื•ืช ืงื™ื•ื, ืžืœื’ื•ืช ื”ืฆื˜ื™ื™ื ื•ืช, ื ื”ืœื™ ืจื™ืฉื•ื ื•ืขื•ื“

ื™ื•ื ืคืชื•ื— ืœืชืืจื™ื ืžืชืงื“ืžื™ื ืขื ืชื–ื” ื‘ืื•ื ื™ื‘ืจืกื™ื˜ืช ื‘ืจ-ืื™ืœืŸ
๐Ÿ“ทื™ื•ื ืจื‘ื™ืขื™ 2.4 | ืฉืขื•ืช: 15:00-18:00 | ื‘ื ื™ื™ืŸ ื ื ื•ื˜ื›ื ื•ืœื•ื’ื™ื”
๐Ÿ“ท ืžืคื’ืฉื™ื ืื—ื“ ืขืœ ืื—ื“ ืขื ื—ื•ืงืจื•ืช ื•ื—ื•ืงืจื™ื ืžื•ื‘ื™ืœื™ื ื‘ืชื—ื•ืžื™ ื”-STEM
๐Ÿ“ท ืกื™ื•ืจื™ื ื‘ืžืขื‘ื“ื•ืช ืžื—ืงืจ ื—ื“ืฉื ื™ื•ืช
๐Ÿ“ท ื›ืœ ื”ืžื™ื“ืข ืขืœ ืžืœื’ื•ืช ืงื™ื•ื, ืžืœื’ื•ืช ื”ืฆื˜ื™ื™ื ื•ืช, ื ื”ืœื™ ืจื™ืฉื•ื ื•ืขื•ื“
Yaron Orenstein (@orensteinyaron) 's Twitter Profile Photo

There are two calls for applications for Azrieli fellowships: ๐Ÿ”น Azrieli Int'l Visiting PhD Fellowship (Fall 2025) ๐Ÿ’ฐ Up to 4 months ๐Ÿ“… Apply by April 22, 2025 ๐Ÿ”น Azrieli Int'l Postdoc Fellowship (2026โ€“27) ๐Ÿ’ฐ Up to 3 years ๐Ÿ“… Apply by Nov 19, 2025 azrielifoundation.org/fellows ๐ŸŒโœจ

Yaron Orenstein (@orensteinyaron) 's Twitter Profile Photo

Finally fulfilled my life-long dream of giving a (too dense) talk at the Israeli Bioinformatics Symposium #IBS2025. Had a blast in the short time I had as I had to leave to #RECOMB2025 #RECOMBseq. My next dream: giving the local keynote!

Finally fulfilled my life-long dream of giving a (too dense) talk at the Israeli Bioinformatics Symposium #IBS2025. Had a blast in the short time I had as I had to leave to #RECOMB2025 #RECOMBseq. My next dream: giving the local keynote!
David Kelley (@drklly) 's Twitter Profile Photo

The short talk and scholarship deadlines for the Keystone Symposia AI in Molecular Biology meeting in September are coming up fast, May 20th. Looking forward to seeing the submissions! keystonesymposia.org/conferences/coโ€ฆ

The short talk and scholarship deadlines for the <a href="/KeystoneSymp/">Keystone Symposia</a> AI in Molecular Biology meeting in September are coming up fast, May 20th. Looking forward to seeing the submissions! keystonesymposia.org/conferences/coโ€ฆ
Yaron Orenstein (@orensteinyaron) 's Twitter Profile Photo

It was a delight to host my former PhD advisor Prof. Ron Shamir and hear about his current research on clustering cancer patients and standardising Parkinson's disease progression scores (in addition to the usual chit-chatting and updates...)

It was a delight to host my former PhD advisor Prof. Ron Shamir and hear about his current research on clustering cancer patients and standardising Parkinson's disease progression scores (in addition to the usual chit-chatting and updates...)