Maintenance is done and we’re back online!

On April 20, one week from today, we kick off our webinar series with a presentation from Dr. Samuel Gonahasa on #malaria in Uganda. Register here! register.gotowebinar.com/register/53662…

From a new paper by Jason H. Moore, PhD and team at UPenn: “Embedding AutoML tools within epidemiology platforms like ClinEpiDB would empower users to directly perform sophisticated analyses...” #malaria #epitwitter Read the paper here- ssph-journal.org/articles/10.33…

@microbiomDB is teaming up with @NIAIDBioIT to host a free 1hr webinar on web-based tools for #microbiome data analysis. Learn to go from raw reads to data visualizations without any coding. Don't think it's possible? Register below and tune in to see! bit.ly/microbio-online

Reminder, it's not too late to register for Clair Null's presentation on #WASH benefits which starts in one hour! register.gotowebinar.com/register/53662…

If you missed our MicrobiomeDB webinar with @NIAIDBioIT today, don't sweat it! You can watch the recording. Learn how to process and analyze 16S #microbiome data in your web browser. vimeo.com/546055765

We are pleased to announce the release of ✨ClinEpiDB 17! ✨New features include a Data Access Dashboard that allows study teams to easily control who gets to access their data on our platform.

We are excited to announce the release of MicrobiomeDB 22, featuring new shotgun metagenomic data from nearly 2000 samples! In addition, this release includes numerous improvements to our #Shiny apps.

Exciting release for our MicrobiomeDB resource! Includes shotgun metagenomic data from Human Microbiome Phase I (741 samples from 103 volunteers) and The Banfield Lab's huge #NICU necrotizing enterocolitis study (1118 samples from 115 infants). Check it out!

MicrobiomeDB ✨v23✨ is now live and includes new metagenomic data from over 1200 stool samples, as well as our first mosquito #microbiome study. Check it out!

📢Join us for a free virtual workshop to learn how to use epidemiological data on ClinEpiDB (a new and improved version✨) and related MicrobiomeDB data. Register today! forms.gle/f1Fppc85go8yAK…

Release 27 is live! 🎉, featuring new shotgun metagenomic data from over 1000 samples collected as part of ongoing studies in Niger and Malaysia. Check it out!

We are aware of and are working to address an issue that results in our system emails being rejected by users’ gmail accounts. Stay tuned.

Haven't posted here in a while, but lots of exciting things happening with our MicrobiomeDB project! Release 34 rolled out the door last week and debuts a new differential abundance app. Check it out with your own data, or any of our curated datasets! #dataviz

Excited to announce the beta release of our new MicrobiomeDB R package! This package is intended to be companion to our MicrobiomeDB website and provides convenient, programmatic access to all of our curated 16S and shotgun metagenomic datasets. #microbiome #rstats #dataviz