Kyle Swanson
@kylewswanson
I'm a PhD student in Computer Science at Stanford University. My research focuses on machine learning applied to biomedicine and drug discovery.
ID: 1235265480341979136
https://swansonkyle.com/ 04-03-2020 18:07:13
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Thank you Stanford University for highlighting our work on #genAI for designing new molecules and drugs! med.stanford.edu/news/all-news/…
The Illustrated AlphaFold bit.ly/the-illustrate… Do you want to know how AlphaFold3 works? It has one of the most intimidating transformer-based architectures, so to make it approachable, we made a visual walkthrough inspired by Jay Alammar's Illustrated Transformer! 🧵 (1/7)
ADMET-AI is now published in Bioinformatics! ADMET-AI provides free, fast, & accurate prediction of absorption, distribution, metabolism, excretion, & toxicity properties of molecules at admet.ai.greenstonebio.com Blog: portal.valencelabs.com/blogs/post/adm… Paper: academic.oup.com/bioinformatics…
📢#AI predicting molecule properties to guide drug discovery. Our updated ADMET-AI paper is now published: 📰 Paper: academic.oup.com/bioinformatics… 🌐 Interactive website admet.ai.greenstonebio.com Great job led by Kyle Swanson, Rabindra Shivnaraine in collaboration with Greenstone Biosciences!
I'm excited to share our Nature Methods primer on language models for biological research. Elana Simon, James Zou, and I explain how to use language models, both natural language models and biological language models, to accelerate biological research. nature.com/articles/s4159…
Very excited to share our primer on LLM for biology Nature Methods! We discuss how to use: ⚡️human & protein LMs (eg #ESM) ⚡️#singlecell & #multimodel LMs ⚡️when to fine-tune, transfer learn etc. Paper nature.com/articles/s4159… Colab tutorial colab.research.google.com/drive/1zIIRGeq… Written for a
Very cool The New Yorker article by Dhruv Khullar on AI for antibiotic discovery. Thank you for covering some of our work with Jon Stokes and James Zou! References below. Chemprop: cell.com/cell/fulltext/… SyntheMol: nature.com/articles/s4225… newyorker.com/magazine/2024/…