📢 Job alert (please RT): my lab is looking for a PhD-level scientist to join us Chan Zuckerberg Biohub Network. We study virus-host interactions across different viral families using a combination of CRISPR/base editing screens, molecular virology and cell bio methods. apply.workable.com/j/97E9644F5A/?…

you know it's a bad day when the lead story in the NYT ends with this correction

I am seeking an Associate R&D Engineer for our amazing BioE team at Chan Zuckerberg Biohub Network. We work on a wide range of important problems related to human health spanning from basic cell biology, infectious disease research, low-cost diagnostics, and outreach in underserved communities.

This is a great example of effective data visualization: clear, honest, and contextualized

COVID Update: One too many smart people has told me or said on TV this week that the pandemic is over. I offer this thread as a single, uniform response to everyone. 1/

Does anyone understand what’s being plotted here? Why does 2-dose drop to zero then go up?

charts from hell 😵‍💫

Published today in Science, a team from CZ Biohub and Max Planck Institute of Biochemistry (MPIB) combined genome engineering, confocal live-cell imaging, mass spectrometry, and data science to systematically map the localization and interactions of human proteins. 🧵 science.org/doi/10.1126/sc…

#OpenCell is mapping our cells one protein at a time and paving a new way to visualize cellular architecture through a free, open-source website. Explore it now: opencell.czbiohub.org youtube.com/watch?v=6j4fpV…

It has been a privilege and pleasure to work with so many amazing scientists Chan Zuckerberg Biohub Network to help reach this milestone! All of our data is freely available to explore and download at opencell.czbiohub.org - check it out and search for your favorite protein!

I'm sure BA.2 is coming but this kind of data seems to be *very* noisy esp when prevalence is low, and given the abundance of blue dots mixed w red dots, I would suspect this is mostly noise

Perhaps a more specific name like `!ugly-hack-added-for-specific-regulatory-reason` would have helped to prevent its widespread (mis)use for other purposes 🤔

This is a fascinating tour through the iconography of our scientific cultural heritage! 😍

Love the hierarchical colormap! 👌🏻

This should be required reading for new grad students (not to mention their PIs)

📢 Very excited to see our work #cytoself now published in Nature Methods . #cytoself is a deep learning method for fully self-supervised protein localization profiling and clustering. Led by Hirofumi Kobayashi with Keith Manuel Leonetti at Chan Zuckerberg Biohub Network nature.com/articles/s4159… 1/n

Check out our latest paper on self-supervised ML!!! w/ Loïc A. Royer 💻🔬⚗️ Hirofumi Kobayashi Keith, built upon OpenCell data. Loic’s tweetorial has all the info 👇

Just launched v0.2.0 of our cell tracking tool 🚀 Check out our GitHub repo: github.com/royerlab/ultra…! Seamlessly combines segmentation & tracking via Python API 🐍 Scales effortlessly to handle massive datasets, like the #zebrahub paper. #CellTracking #Bioinformatics

Interested in computationally exploring how proteins are related across species? Join us Arcadia Science and engage collaboratively to design, create, and iterate on workflows and tools for comparing proteins in diverse organisms. Check out the job ad ➡️jobs.lever.co/arcadiascience…

Pytorch meets baby worms! It was a pleasure to work with Dave Matus and everyone at Arcadia Science to help bring this across the finish line (and on a tight deadline)!