Join us at ICCE 2023 in Venice! We are planning a satellite event at ICCE 2023 - we will introduce enviPath, with theory sessions and hands-on exercises. We will also have an exciting list of speakers! Register now - more updates soon! icce2023.com/satellite-even…

Application deadline approaching for two positions to further develop enviPath, our internationally unique online resource on contaminant biotransformation. Assistant in chemical data science: tinyurl.com/mbbuaxn7 Postdoc in Computational Metabolomics: tinyurl.com/5h8k9w5c

New research article: Development of a seismic loss prediction model for residential buildings using machine learning – Ōtautahi / Christchurch, New Zealand doi.org/10.5194/nhess-…

Want to do a funded PhD with us “Using Cryptosporidium genomics for investigating outbreaks and disease transmission”. Apply by May 1st findaphd.com/phds/project/u…

An unbiased de novo network analysis uncovering causal genes and the developmental intersection between autism and co-occurring traits medrxiv.org/cgi/content/sh… #medRxiv

While Zac Pullar-Strecker ran the experiments for his paper "Hitting the target", he implemented MEMENTO, taking care of parallelization, caching, and checkpointing. We found it really useful for evaluating new methods and decided to publish it: wickerlab.org/publication/me…

How do we identify and overcome over-specialization #bias in chemical databases? Check Katharina Dost's latest publication, joint work with Zac Pullar-Strecker, Liam Brydon, Kunyang Zhang, Jasmin Hafner, and Pat Riddle. #cheminformatics dx.doi.org/10.1186/s13321… jcheminf.biomedcentral.com/articles/10.11…

new: "Combatting over-specialization bias in growing chemical databases" jcheminf.biomedcentral.com/articles/10.11…

Analyzing movies and VOCs in cinema audiences' breath - follow-up of our award-winning research. We extracted features from movies and linked them to changes in concentrations of VOCs. Check the article here: dx.doi.org/10.1109/TAFFC.…

Our new automatic rule extraction tool enviRule - extract transformation rules directly from your data set. Soon available in enviPath: doi.org/10.1093/bioinf…

Exciting fully funded PhD opportunity in Auckland, supervised by Katerina Taskova and Davide Mercadante , the student will both be in our and Davide's lab. Work on protein design and discovery of new proteins fit for industrial applications. wickerlab.org/?p=494

Pleased to have been able to contribute to this work. De novo network analysis reveals autism causal genes and developmental links to co-occurring traits life-science-alliance.org/content/6/10/e…

Great work by Catriona Miller, with help from Evgeniia Golovina, PhD, Joerg Wicker and Jessie Jacobsen

But i'll let Catriona tell you in her own words youtu.be/nMwHTHQe7AA

Throwback Tuesday! As part of the enviPath+ project, we aim to bring the enviPath platform to a new level. We held a scoping workshop in July to understand how to best meet the needs of our users and collaborators. We thank the participants for their valuable inputs!

Throwback Tuesday! The whole enviPath team was present at the International Conference on Chemistry and the Environment 2023 in Venice. We organized a workshop around the enviPath platform, featuring talks regarding databases, predictive models, and applications of enviPath.

New publication alert! ‘Combining predictive and analytical methods to elucidate pharmaceutical biotransformation in activated sludge’ pubs.rsc.org/en/content/art…

New publication alert! “enviRule: an end-to-end system for automatic extraction of reaction patterns from environmental contaminant biotransformation pathways” academic.oup.com/bioinformatics…

New data package: EAWAG-SLUDGE ! EAWAG-SLUDGE contains biotransformation data from activated sludge experiments extracted from 27 scientific articles, including our own paper by Trostel et al. (2023) envipath.org/package/7932e5…

New: "AdductHunter: identifying protein-metal complex adducts in mass spectra" jcheminf.biomedcentral.com/articles/10.11…