Our latest work "Metabolic Perceptrons for Neural Computing in Biological Systems" is out on Nature Communications, BioRetroSynth Research Group and Bonnet's lab, Thanks to Manish Kushwaha Mathilde Koch Peter Voyvodic 🧬🍄 Soudier Paul Jean Loup Faulon nature.com/articles/s4146…

Check out a new release of the RetroPath software, it makes use of MCTS a reinforcement learning method

Very nice presentation of Manish Kushwaha describing cell-free perceptron at the Cell Free Systems Conference in Boston

Olivier Borkowski presents his cool work demonstrating the use of active learning in cell free system optimization #cellfreesystems19

Happy to share our latest development with RetroPath: Reinforcement Learning for Bio-Retrosynthesis pubs.acs.org/doi/10.1021/ac…

A bit delayed on PMID:32312991… nice collaborative work between Olivier Borkowski and Mathilde Koch with the help of Amir Pandi, Soudier Paul, Agnès Zettor, and Angelo Batista, congrats!

Happy to announce the release of the first Galaxy toolshed for SynBio and metabolic engineering. Easy to use workflows to build pathway libraries from specification to DNA parts can be found @ galaxy-synbiocad.org

Happy to announce an open research associate position in my lab BioRetroSynth Research Group for biosensor engineering. Information on how to apply can be found at jfaulon.com/open-positions/

Artificial Metabolic Networks: enabling neural computation with metabolic networks biorxiv.org/content/10.110…

We are seeking a research associate in metabolic engineering to work on a European funded project, further details are at jfaulon.com/open-positions/

Happy to share #GalaxySynBioCAD our latest publication Nature Communications (rdcu.be/cUzbo) a first step toward a user-friendly operating system for automated metabolic engineering and Synbio. Can be freely used at galaxy-synbiocad.org

Check out the genesis and feedback about the development of the #GalaxySynBioCAD portal with our "behind the paper" blog post: "Towards automated synthetic biology” (go.nature.com/3qwIqWV). Thanks to Joan and Thomas BioRetroSynth Research Group

Delighted to announce the 2023 Turing Workshop on AI, Engineering Biology & Beyond. Come join us in Edinburgh! 13-14 March 2023 tinyurl.com/5xh9x55k Organised by Edinburgh, Bristol and UCL with Thomas Gorochowski & CSSB Lab Centre for Engineering Biology ANC@Edinburgh School of Informatics, The University of Edinburgh The Alan Turing Institute #synbio #AI

We are recruiting a Software Developer. You’ll be working around liquid handlers and developing tools for metabolic engineering, cell-free systems and biosensing on Galaxy-SynBioCAD (galaxy-synbiocad.org). Learn more here: jfaulon.com/open-positions/

Happy to announce the release of our latest work published Nature Communications. We integrated machine learning with mechanistic modeling to improve microorganisms‘ genome-scale phenotype predictions doi.org/10.1038/s41467…

Following our recent publication, in this blog, we discuss genome-scale metabolic models phenotype prediction challenges and introduce a hybrid machine-learning model that outperforms traditional methods with less data bioengineeringcommunity.nature.com/posts/making-m…

Below the announcement of a workshop ‘AI Methods and Models for (Bio)Catalysis and Synthetic Biology’ June 5, 2024, at the University of Montpellier, France. Registration is free but mandatory at forms.gle/RiNwcW7Hukb8h9…

Call for Abstracts : AI Methods and Models for (Bio)Catalysis and Synthetic Biology, June 5, 2024, University of Montpellier, France Great lineup of keynote speakers! Information and registration: forms.gle/RiNwcW7Hukb8h9… To submit an abstract: forms.gle/qggfyHw9mMACrm…

Today is the deadline to register to our workshop "AI Methods and Models for (Bio)Catalysis and Synthetic Biology". We have more than 100 participants and Registration is free but necessary if you want to receive the online links and the abstract booklet. forms.gle/RiNwcW7Hukb8h9…