Jan Baumbach
@janbaumbach
Director of the Institute for Computational Systems Biology at the University of Hamburg.
ID: 2719622734
https://www.cosy.bio 21-07-2014 10:01:52
1,1K Tweet
857 Followers
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Comparative evaluation of feature reduction methods for drug response prediction Scientific Reports 1. This study is the first to compare nine feature reduction (FR) methods for drug response prediction (DRP) on cell line and tumor transcriptomes, using over 6,000 machine learning (ML)
We concluded the progress in our Horizon Europe projects dAIbetes and Microb-AI-ome over the past year with general assemblies in the beautiful city of Rome! The joint thought-provoking workshop made it even more memorable! #Bioinformatics Jan Baumbach
Meet StrucTFactor - our deep learning method for predicting #TranscriptionFactors using 3D structural information! It significantly enhances #TranscriptionFactor predictions outperforming existing methods by up to 17%! Learn more: academic.oup.com/bioinformatics… Jan Baumbach
min.uni-hamburg.de/ueber-die-faku… Fernando Delgado Chaves Linda Baumbach, Ph.D. Jan Baumbach
🚀 Exciting news! CoSyBio, as part of UHH - MIN-Fakultät, we are collaborating with ParityQC to develop a groundbreaking #QuantumComputing framework for personalized medicine. 🧬💻 Read more: lnkd.in/dB4gXSMv #Bioinformatics #Innovation Jan Baumbach
📢Exciting news! We’re seeking incoming #AI and #MachineLearning postdocs to drive groundbreaking #LifeSciences research. Don’t miss this unique opportunity! Jan Baumbach
Predicting drug responses is crucial for #PersonalizedMedicine. Our study reveals that #TranscriptionFactor activity-based methods outperform others in this task . #MachineLearning Jan Baumbach nature.com/articles/s4159…
Meet BioChatter! CoSy.Bio contributed to this open source framework for interfacing with #LLMs in biomedical research while ensuring user safety and privacy. Explore BioChatter at nature.com/articles/s4158… Jan Baumbach Andreas Maier
✨Join us in transforming the field of #LifeSciences! Be at the forefront of groundbreaking innovations in #ArtificialIntelligence and #MachineLearning. Apply now! Jan Baumbach
Our findings have significant implications for #StrokeRecovery! Jan Baumbach sciencedirect.com/science/articl…
Work at the interface of IT and Computational Biology! CoSy.Bio is hiring a System Administrator! Join us at the University of Hamburg! 📍 Hamburg 🗓️ Apply by June 27 🔗 uni-hamburg.de/stellenangebot… Jan Baumbach
Join CoSy.Bio in Hamburg! We are looking for a System Administrator to support our team. 🔧 Linux/macOS | HPC | Automation | Bioinformatics 📍 Hamburg 🗓️ Apply by June 27 🔗 stepstone.de/stellenangebot… Jan Baumbach
Introducing DREAMER, a groundbreaking tool that identifies mechanisms of #AdverseDrugReactions (ADRs) by linking drug and disease phenotypes to protein interaction networks. Here, DREAMER revealed #MolecularMechanisms behind 67 ADRs. Jan Baumbach sciencedirect.com/science/articl…
We compared various models predicting changes in #KneePain of #Osteoarthritis patients due to participation in supervised education and exercise and propose a concise 6-variable model for personalized prediction. Jan Baumbach Linda Baumbach, Ph.D. rehab.jmir.org/2025/1/e60162
Defective interfering particles (DIPs) as potential novel #Antivirals! Our meta-analysis of 20 #Influenza datasets provides insights for selecting candidates for antiviral treatment design. Jan Baumbach Tanja Laske academic.oup.com/nargab/article…
When is "good enough" actually good enough for #PrognosticModels? Our commentary tackles this question with a structured analysis of 16 scenarios + practical approaches for development decisions for healthcare-related prognostic models. Jan Baumbach
Presenting DIGGER 2.0: we extended our #AlternativeSplicing software DIGGER with new functionalities, including support of the mouse interactome and NEASE for #EnrichmentAnalysis! Check it out here: exbio.wzw.tum.de/digger/ Jan Baumbach
