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The latest chapter to the Genomic Encyclopedia of Bacteria and Archaea in Cell Genomics: 1000s of biosynthetic gene clusters ID'd in Actinobacteria. From team led by Joint Genome Institute Leibniz-Institut DSMZ. Nikos Kyrpides Nigel Mouncey Berkeley Lab jgi.doe.gov/new-actinobact…

IMG/M now featuring: - 100k microbial genomes - 46k metagenomes - 69 billion genes - 23 trillion bp of microbial/metagenomes - advanced scaffold search - ANI for metaG bins - ... Full list of upgrades in the new NAR paper: academic.oup.com/nar/advance-ar… Integrated Microbial Genomes & Microbiomes (IMG/M) @JGI Berkeley Lab

Happy #thanksgiving! Thanksgiving dilemma like this is easy to handle. We always opt for the full menu. Let’s keep this thanksgiving spirit alive throughout the year and share the full menu of #metadata when #publishing or depositing data to public scientific data repositories.

Happy 25th anniversary to #GOLD, the @JGI’s Genomes OnLine Database, the only resource in the world with nearly 200,000 👀 curated environmental samples with canonical names! (🧵/6) jgi.doe.gov/silver-age-of-… CC: TBK Reddy Berkeley Lab LBNL BioSci DOE Office of Science #JGI25

Happy Valentine's Day! If you are tied to a scientist, I am pretty sure you experience this very often, not just on #ValentinesDay

Did you always wish for standardized names for #microbiome samples? Your wish just came true! Check out this latest paper from the #GOLD team Joint Genome Institute on how you can describe your #metagenomes and #metatranscriptomes with curated, easy-to-understand names academic.oup.com/database/artic…

Identifiers given to #microbiome samples often present challenges. But there are ways for researchers to name their samples using a standardized approach implemented in GOLD. Learn more: buff.ly/3JFRCmn h/t TBK Reddy Supratim Mukherjee Nikos Kyrpides Joint Genome Institute

Happy to share our latest review describing #microbiome analysis tools at Joint Genome Institute link.springer.com/article/10.100… Access full text at rdcu.be/ddnsF

Happy Father’s Day. A dad’s day out at the beach. A memory from the coast of #Maine (Bar Harbor). ⁦Shruthi Reddy⁩ Jay Reddy

Congratulations to Jay Reddy on high school graduation. Next stop ⁦UC Santa Cruz⁩, ⁦Baskin Engineering at UCSC⁩ CS, Computer Game Design👏💐

We celebrate #WorldMicrobiomeDay by sharing a publication describing "Standardized naming of microbiome samples in Genomes OnLine Database" academic.oup.com/database/artic… Access 197K manually curated microbiome samples at gold.jgi.doe.gov/biosamples Joint Genome Institute KBase National Microbiome Data Collaborative Integrated Microbial Genomes & Microbiomes (IMG/M)

When out for lunch and dilemma is to sit inside or outside, just go for In-N-Out Burger Jay Reddy

Learn how to get the most out of our Integrated Microbial Genomes & Microbiomes (IMG/M) system at the next Microbial Genetics & Metagenomics workshop — 5 days of hands-on exercises involving comparative analysis, visualization and interpretation of genomic and metagenomic datasets. mgm.jgi.doe.gov

Just spent an amazing #FathersDay working on the car with my son. We tackled replacing the cabin & engine air filter, and even changed the battery. Proud dad moment seeing him get hands-on and learning the ropes. 🚗🔧👨‍🔧👨‍👦

There is no replacement for quality metadata. Catch our stellar interns @VanHanke & @Anuhareddy again tomorrow to learn how Genomes OnLine Database can help power your discoveries at #JGI2024

Exciting News! Our manuscript is now public. Dive into the latest updates! Genomes OnLine Database (GOLD) v.10: new features and updates academic.oup.com/nar/article/do… Thrilled to share this work with the community! Joint Genome Institute LBNL BioSci Int Soc Biocuration ROR community (inactive Nov 2024) GSC

We are hosting a workshop titled “Genomes Online Database (GOLD) – A curated metadata resource for powering discoveries” at the Biocuration 2025 conference on April 6th, 10:30 AM to 12:30PM US CST. Register to Join over the Zoom forms.gle/w8rZ4cP3D1rrY4…

Think Sharing Data Is Tough? Try Sharing Metadata! or find out from our latest manuscript describing the barriers. Perceptual and technical barriers in sharing and formatting metadata accompanying omics studies: Cell Genomics cell.com/cell-genomics/…