It was excellent conference of all oxDNA and oxRNA users and developers back at its original place, Oxford university. Thanks to Ard, Jonathan Doye and Ollie for organization, great science and discussions!

Our collaboration with Rief and Simmel labs is now out in Nature Communications : nature.com/articles/s4146… A single-molecule study of strand invasion reactions: DNA invading DNA, RNA invading RNA, as well as DNA/RNA hybrids, accompanied by our oxDNA and oxRNA simulations

A new tutorial by our student Sarah on using oxDNA and oxRNA ecosystem to simulate DNA origami: arxiv.org/abs/2409.13206 No coding needed, just web browser and your starting design file (cadnano or oxdna file format). Article also accompanied by video tutorial: youtube.com/watch?v=5-rgMe…

We invite you to apply to not only one but two events to advance bottlenecks to nanotechnology development: 1. Molecular Systems Engineering Platform Launch One of the major bottlenecks holding back progress on nanotechnology is better software and simulation tools—until now.

Excited to join the Foresight Institute workshop on nanotechnology!

We are grateful for our new NSF POSE grant that allows us to expand and establish oxDNA open source ecosystem. Do you use (or want to) oxDNA and oxRNA , are there any features that you miss, any bottlenecks? We want to hear from you so that we can make the tools better, please DM me!

.Petr Šulc, Michael Matthies et al. demonstrate how the presence of single- & double-stranded overhangs drive entropy-induced conformational changes in 2D #DNAOrigami #nanostructures. #oxDNA Biodesign Institute at Arizona State University Arizona State University TUM Department of Science, Technology & Society TU München Read: go.acs.org/bnw

Using oxDNA and oxRNA simulations and experiments, Petr Šulc lab shows that adding functionalization (e.g. proteins) onto a DNA origami causes entropy-driven bending, with implications for nanostructure designs Read it here 🔗 go.acs.org/bnD

Combination of Coevolutionary Information and Supervised Learning Enables Generation of Cyclic Peptide Inhibitors with Enhanced Potency from a Small Data Set #machinelearning #compchem pubs.acs.org/doi/abs/10.102…

Our new article with J Russo, D. Pinto and F. Sciortino out in ACS Nano : We use our #SATAssembly method to design particles that assemble into 3D quasicrystal clusters, paving a way to their experimental realization with DNA nanostructures: pubs.acs.org/doi/10.1021/ac…

Many thanks to Nadace Neuron for this award, and my students and collaborators who made all this work that was recognized possible.

Navrhuje DNA a RNA nanostruktury – stavebnice budoucnosti pro diagnostiku, léky i nové materiály. Laureát Ceny Neuron 2024, profesor na Arizona State a TU Mnichov, autor 70+ publikací včetně Science a Nature Nanotechnology. 💡 Poznejte Petra Šulce: 👉nadaceneuron.cz/person/petr-su…