On parle de nous :) merci le GDR BIMMM ! @gdrbimmm

Interested in a postdoc combining k-mers, RNA and cancer? Come and join us at I2BC Paris-Saclay to work on 2 collaborative projects involving our group, Morillon’s lab, Camille Marchet @[email protected], Malfoy and others. Check the job description here: sfbi.fr/emplois/offre/…

The registration form for attending the MIGGS symposium is now open at the following link: miggs.mathnum.inrae.fr/inscription Thank you to all the authors for their contributions, which have helped us create this great program.

We encountered a privacy issue concerning the data of some participants at the symposium. If this affects you, we have reached out via email. We apologize for the inconvenience.

Nous y ferons une présentation dans la session "Methods"

Registration for on-site attendance at the MIGGS symposium has now concluded. Nevertheless, the registration portal has been reopened exclusively for those wishing to participate online. miggs.mathnum.inrae.fr/inscription

To get to the Turing room: 1. Go through the doors. 2. Take the stairs to the first floor. 3. Turn left to corridor 4. Enter the Turing room door.

Alexandra CALTEAU is presenting LABGeM developments on #pangenomics MIGGS in Lille

This morning, Astrid van den Brandt presented "Interactive visualization of large pangenome graphs",

Eloi Durant presented his work with Francois Sabot (@francoissabot.bsky.social) "Unraveling pangenome graphs with pivot paths and variation glyphs"

Francois Sabot (@francoissabot.bsky.social) Sigfried Dubois presented his work with Claire Lemaitre "Pangenome graph manipulation for local visualisation with pancat"

Francois Sabot (@francoissabot.bsky.social) Claire Lemaitre And I was last with "Vizitig: interactive sequence de Bruijn graphs using databases" by my student Bastien Degardins

Francois Sabot (@francoissabot.bsky.social) Claire Lemaitre This afternoon we resume with our second invited speaker Zamin Iqbal who presents challenges in Bacterial pangenomes

Then two researchers from Toulouse, Benjamin Linard with "Simplified pangenome graph traversals with PSSM scoring : search for motifs differentials"

And Matthias Zytnicki with "Assessing genome conservation on pangenome graphs withPanSe"

Now, @teojcryan.bsky.social presents "Exploring de Bruijn Graphs as a Framework for Metagenomic Data Representation"

@teojcryan.bsky.social Mattia Sgro close bacterial pangenomics session with "Pangenome graphs improve bacterial plasmid binning in short-read assemblies"

Thank you to the 75 attendees and the 13 speakers. See you next year for a new edition of the MIGGS symposium!

Thank you to the organisers for the opportunity to present some of my PhD work at MIGGS!

noMapper: A mapping-free natural language processing-based technique for sequence search in nanopore long-reads bmcbioinformatics.biomedcentral.com/articles/10.11…