Phew. 😅 The last PhD in our lineup has just defended! Here you see Isik Kantarcioglu with her famous slide 11, and the happy faces right after the defense of her thesis on the dynamics of TolC. The preprint of her joint computational/experimental endeavor: dlvr.it/T39t4N

Sevgili Isik Kantarcioglu da tezini harika bir komiteye savundu. Bu yaz bu kadar... Desteklerinize çok teşekkürler Mustafaoglu Lab, Ozlem Keskin, Sensoy Computational Biophysics Lab, @itugurlab & Ali Rana Atılgan (evet, sınıf soğuktu 🥶).

Here they come: Isik Kantarcioglu @mberksoz

Funding alert! Our project on 'Modeling Molecular Mechanisms of Efflux Pumps in Resistance towards Different Antibiotics' will be on our agenda for the next 2 years. This expands on Isik Kantarcioglu's thesis topic and her paper: biorxiv.org/content/10.110…

pubs.acs.org/doi/10.1021/ac… Our paper titled "Deciphering GB1’s Single Mutational Landscape: Insights from MuMi Analysis" is published in The Journal of Physical Chemistry! In this paper, we first delve into molecular dynamics simulations of the wild-type GB1-IgG-Fc complex

This MuMi scheme explains the single mutational landscape of GB1 IgG-Fc binding by focusing on dominant intermolecular hydrogen bonds. midstlab Furkan Canan Atilgan 🌈🧘‍♀️👩‍💻 pubs.acs.org/doi/full/10.10…

Hear, hear!

The 2024 #NobelPrize laureates in chemistry Demis Hassabis and John Jumper have successfully utilised artificial intelligence to predict the structure of almost all known proteins. In 2020, Hassabis and Jumper presented an AI model called AlphaFold2. With its help, they have

i think about this a lot

"Açık Radyo kâinatın tüm seslerine, renklerine ve titreşimlerine açık kalacaktır."

Season's greetings from RCSB PDB: rcsb.org/news/67478994f…

Boykota yardımcı bir websitesi Mülksüzleştirme Ağları | Graph Commons graphcommons.com/h/mulksuzlesti…

We’re renewing our collaboration with Google DeepMind! We'll keep developing the AlphaFold Database to support protein science worldwide 🎉 To mark the moment we’ve synchronised the database with UniProtKB release 2025_03 ebi.ac.uk/about/news/tec… #AlphaFold

Depremin 3. yılında Hatay…

Gül atan dede. 🩷🌹 Bugün 6 Şubat’ın yıl dönümünde Hatay’da anmalar var. Bu yürüyüşler sadece hayatını kaybedenleri hatırlamak için değil; bitmeyen sorunları, karşılanmayan talepleri, biriken öfkeyi dile getirmek için de yapılıyor. Ama aynı zamanda, yan yana durmanın, yalnız

A super interesting new study from Harvard Business Review. A 8-month field study at a US tech company with about 200 employees found that AI use did not shrink work, it intensified it, and made employees busier. Task expansion happened because AI filled in gaps in knowledge,