Database-independent de novo metaproteomics of complex microbial communities. cell.com/cell-systems/f… Cell Systems

Database-independent de novo #metaproteomics of complex microbial communities By Hugo Kleikamp, Martin Pabst and colleagues TU Delft SIAM-microbiology cell.com/cell-systems/f…

Database-matching independent metaproteomic analysis of microbes #NBThighlight cell.com/cell-systems/f…

Happy to showcase the current effectiveness and speed of de novo peptide sequencing for metaproteomics. github: github.com/hbckleikamp/No… paper: cell.com/cell-systems/f… #NovoBridge #Metaproteomics #denovo #Bioinformatics

Congratulations to Martin Pabst and all co-authors on impressive article aimed at studying the unique surface layer of #anammox bacteria at The ISME Journal. Hugo Kleikamp Michele Laureni Mark van Loosdrecht  nature.com/articles/s4139…

Omicron seems to decouple sewage data and number of infections #Covid #sewage #WBE No early warning or correlation with the sharp increase in infections

Our new paper has been Rxived. Detailed analysis of aerobic granular sludge microbiome by Hugo Kleikamp and Martin Pabst. Comparative metaproteomics demonstrates different views on the complex granular sludge microbiome biorxiv.org/content/10.110…

Former SIAM PhD Hugo Kleikamp published a comparative metaproteomic study on the complex aerobic granular sludge microbiome obtained using various ‘omic’ approaches and reference sequence databases. Read more: biorxiv.org/content/10.110…

A new thesis fit for the spring season. Congratulations to Hugo Kleijkamp, Looking forward to the defence. Faculteit TNW / Faculty of Applied Sciences #metaproteomics

Promotie H.B.C. Kleikamp Benchmarking and developing mass-spectrometry based omics approaches for complex microbiomes. Maandag 16 Mei #metagenomics #metaproteomics TU Delft tudelft.nl/evenementen/20…

PhD defence by Hugo Kleikamp first nice online discussion with @marc_strous on root-causes of biases

Congratulations, very well defended the work

Exciting news🎉#Registration and #abstractsubmission 📝to the 𝟱𝘁𝗵 𝗜𝗠𝗦 are now OPEN. Join us in Avignon 📅April 25-27, 2023 for a dynamic event full of insightful discussions and networking opportunities 👉ims23.com #metaproteomics

NovoLign: metaproteomics by sequence alignment biorxiv.org/cgi/content/sh… #bioRxiv

A research team led by Hugo Kleikamp presents proteomics data which establishes #selenocysteine as a dynamic response in hydrogenotrophic #methanogens under oxidative stress. Read more in this ES&T article: go.acs.org/8Tn

The NovoLign pipeline is made publicly available by Hugo Kleikamp with the support of SIAM-microbiology Faculteit TNW / Faculty of Applied Sciences github.com/hbckleikamp/No….